RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 PEX1O43933 1283 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 F7P08709 466 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 ENO2P09104 434 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 ZNF888P0CJ79 500 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 SCTRP47872 440 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 MEOX1P50221 254 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 OLR1P78380 273 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 HSF1Q00613 529 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 RBBP5Q15291 538 aaKnown RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 ZNF468Q5VIY5 522 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 ARHGAP11AQ6P4F7 1023 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 CCDC137Q6PK04 289 aaKnown RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 SPNS3Q6ZMD2 512 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 C3P1Q6ZMU1 363 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 MBOAT1Q6ZNC8 495 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 SULF2Q8IWU5 870 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 UTP15Q8TED0 518 aaKnown RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 RND1Q92730 232 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 FBXL8Q96CD0 374 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 RHBGQ9H310 441 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 TP63Q9H3D4 680 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-201ENST00000267935 KCNJ16Q9NPI9 418 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 FBXW2Q9UKT8 454 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 SH2B3Q9UQQ2 575 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 VWA7Q9Y334 891 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 ASB1Q9Y576 335 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 KCNE2Q9Y6J6 123 aa13.3□□□□□ -0.28
COMMD4-201ENST00000267935 A0A088AWK7 358 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 TCRBV16S1A1N1A0A5B0 115 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 A8MUA0 341 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
COMMD4-201ENST00000267935 ZNF10P21506 573 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CHRNB4P30926 498 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-201ENST00000267935 HNF4AP41235 474 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 MAGEA3P43357 314 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 STXBP1P61764 594 aaKnown RBP13.29□□□□□ -0.28
COMMD4-201ENST00000267935 BTG2P78543 158 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CDSNQ15517 529 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 PHKG1Q16816 387 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 BBS9Q3SYG4 887 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 RNFT1Q5M7Z0 435 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 SPANXN3Q5MJ09 141 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 ACAD11Q709F0 780 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 SHISA5Q8N114 240 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CYP4Z2PQ8N1L4 340 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 NAT8LQ8N9F0 302 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 B3GNT7Q8NFL0 401 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 C16orf52Q8NHV5 167 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 PPANQ9NQ55 473 aaKnown RBP13.29□□□□□ -0.28
COMMD4-201ENST00000267935 ZFATQ9P243 1243 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CORO1CQ9ULV4 474 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-201ENST00000267935 ERVK-11Q9UQG0 969 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 YARS2Q9Y2Z4 477 aaKnown RBP13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CACNA1CQ13936 2221 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 OTOGQ6ZRI0 2925 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 CCDC168Q8NDH2 2452 aa13.29□□□□□ -0.28
COMMD4-201ENST00000267935 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 ADAM10O14672 748 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 ZFAND5O76080 213 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 GUCA1CO95843 209 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 AHSGP02765 367 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 SERPINA6P08185 405 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 CD1EP15812 388 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 TFEBP19484 476 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 MAOAP21397 527 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 PTGER1P34995 402 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 RAB8AP61006 207 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 RCN2Q14257 317 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 CRYMQ14894 314 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 PPP1R7Q15435 360 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 TERF2Q15554 542 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 CATSPEREQ5SY80 951 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 HECTD2Q5U5R9 776 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 CES4AQ5XG92 561 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 TTC27Q6P3X3 843 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 NXPE4Q6UWF7 544 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 RGS9BPQ6ZS82 235 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 CD163Q86VB7 1156 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 GPALPP1Q8IXQ4 340 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 ARMC10Q8N2F6 343 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-201ENST00000267935 TTLQ8NG68 377 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 LILRB4Q8NHJ6 448 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 NEIL2Q969S2 332 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 VMP1Q96GC9 406 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
COMMD4-201ENST00000267935 PNO1Q9NRX1 252 aaKnown RBP13.28□□□□□ -0.28
COMMD4-201ENST00000267935 MRPS33Q9Y291 106 aaKnown RBP13.28□□□□□ -0.28
COMMD4-201ENST00000267935 JRKLQ9Y4A0 524 aa13.28□□□□□ -0.28
COMMD4-201ENST00000267935 PDZD2O15018 2839 aa13.27□□□□□ -0.28
COMMD4-201ENST00000267935 ZNHIT1O43257 154 aa13.27□□□□□ -0.29
COMMD4-201ENST00000267935 HS6ST1O60243 411 aa13.27□□□□□ -0.29
COMMD4-201ENST00000267935 DNAJB6O75190 326 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms