RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 A0A096LPI6 279 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 INHAP05111 366 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 C21orf33P30042 268 aaPredicted RBP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 MLLT10P55197 1068 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 APOFQ13790 326 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 SLBPQ14493 270 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 SEMA3AQ14563 771 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 KIAA0319Q5VV43 1072 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 ATG9BQ674R7 924 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 BEND5Q7L4P6 421 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 OTOP2Q7RTS6 562 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 SEC14L4Q9UDX3 406 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 MLXQ9UH92 298 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 IKZF2Q9UKS7 526 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 PCDHB14Q9Y5E9 798 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 MYO7AQ13402 2215 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 DAPL1A0PJW8 107 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 CARNS1A5YM72 827 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 LDB2O43679 373 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 MATN4O95460 622 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 BMP4P12644 408 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 AVPR1BP47901 424 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 GPRC6AQ5T6X5 926 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 ZSWIM9Q86XI8 627 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 Q8N402 240 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 JPH3Q8WXH2 748 aaPredicted RBP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 NCSTNQ92542 709 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 RAB8BQ92930 207 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 EFHD2Q96C19 240 aaPredicted RBP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 OR2AG1Q9H205 316 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 KCNH6Q9H252 994 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 ENAMQ9NRM1 1142 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 PPIEQ9UNP9 301 aaKnown RBP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 FAM47E-STBD1D6RA91 191 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 FGF4P08620 206 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF24P17028 368 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 SSTR4P31391 388 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 MNDAP41218 407 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 MAPK9P45984 424 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 DSTNP60981 165 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 ZXDBP98169 803 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 EXOC3L2Q2M3D2 409 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 SHQ1Q6PI26 577 aaKnown RBP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 RBM23Q86U06 439 aaKnown RBP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 PIGXQ8TBF5 258 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 TMEM80Q96HE8 168 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 MAPKAP1Q9BPZ7 522 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 AKAP7Q9P0M2 348 aaPredicted RBP11.15□□□□□ -0.62
VPS33A-201ENST00000267199 USP3Q9Y6I4 520 aa11.15□□□□□ -0.62
VPS33A-201ENST00000267199 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 C6orf47O95873 294 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 FHP07954 510 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 LAMP2P13473 410 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ATP1B2P14415 290 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 WASP42768 502 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ATAT1Q5SQI0 421 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 HMBOX1Q6NT76 420 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 CEACAM20Q6UY09 585 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PRSS48Q7RTY5 328 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 HMGN2P46Q86SG4 172 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 CNTN4Q8IWV2 1026 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 NPAS3Q8IXF0 933 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 TRIB2Q92519 343 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 OR51B5Q9H339 312 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ZSCAN32Q9NX65 697 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 A0A075B6Q4 140 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 C2orf92A0A1B0GVN3 265 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 K7ERQ8 282 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 M0QZQ0 153 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 OAZ2O95190 189 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 GALTP07902 379 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 STOMP27105 288 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 TLX1P31314 330 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ARCN1P48444 511 aaKnown RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 SLC3A1Q07837 685 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 SF3B4Q15427 424 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 SPHARQ15513 63 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 RAB41Q5JT25 222 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ADNP2Q6IQ32 1131 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 AGTRAPQ6RW13 159 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 GDPD4Q6W3E5 623 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 KRT77Q7Z794 578 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PIANPQ8IYJ0 282 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 FAM46DQ8NEK8 389 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 OR6C4Q8NGE1 309 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 MAL2Q969L2 176 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 FUZQ9BT04 418 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 B4GALT6Q9UBX8 382 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ABCG2Q9UNQ0 655 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 CAPNS1P04632 268 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 KLK1P06870 262 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 ACADMP11310 421 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 COQ5Q5HYK3 327 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 LETMD1Q6P1Q0 360 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 PNCKQ6P2M8 343 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 Q6ZVL8 140 aa11.14□□□□□ -0.63
VPS33A-201ENST00000267199 TSPYL5Q86VY4 417 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-201ENST00000267199 THOC6Q86W42 341 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms