RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NUAK1O60285 661 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 FKBP9O95302 570 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 C1SP09871 688 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 ENGP17813 658 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 GADD45AP24522 165 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 ACRV1P26436 265 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 CTSKP43235 329 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 KIR3DL1P43629 444 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 NEK2P51955 445 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 CSNK2BP67870 215 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 CARTPTQ16568 116 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 CBLL1Q75N03 491 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 SCAMP4Q969E2 229 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 CMTM7Q96FZ5 175 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 HHIPQ96QV1 700 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 TRPV4Q9HBA0 871 aa16.33■□□□□ 0.2
FOXA1-201ENST00000250448 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.33■□□□□ 0.2
FOXA1-201ENST00000250448 M0R082 166 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 FPGTO14772 594 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 KCNK2O95069 426 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 KCNK5O95279 499 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 C9P02748 559 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 ANXA5P08758 320 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 FCHO2Q0JRZ9 810 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF234Q14588 700 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 GRIN2CQ14957 1233 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 TBCEQ15813 527 aaPredicted RBP16.32■□□□□ 0.2
FOXA1-201ENST00000250448 DUOXA1Q1HG43 343 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 USP43Q70EL4 1123 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 PTOV1Q86YD1 416 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 P3H2Q8IVL5 708 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 NACC2Q96BF6 587 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 APIPQ96GX9 242 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 EGLN2Q96KS0 407 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SLC32A1Q9H598 525 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SNX6Q9UNH7 406 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 COL4A3Q01955 1670 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 ZNF106Q9H2Y7 1883 aaKnown RBP16.32■□□□□ 0.2
FOXA1-201ENST00000250448 A8MU76 341 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 EPN2O95208 641 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 DBTP11182 482 aaKnown RBP16.32■□□□□ 0.2
FOXA1-201ENST00000250448 TIMP2P16035 220 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 PRPH2P23942 346 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 ELP6Q0PNE2 266 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 PDGFRLQ15198 375 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 MACC1Q6ZN28 852 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SLC7A5P1Q8MH63 180 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 FAM83FQ8NEG4 500 aaPredicted RBP16.32■□□□□ 0.2
FOXA1-201ENST00000250448 APOLD1Q96LR9 279 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 MCCC1Q96RQ3 725 aaPredicted RBP16.32■□□□□ 0.2
FOXA1-201ENST00000250448 GABARAPL3Q9BY60 117 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SIAEQ9HAT2 523 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 CRLS1Q9UJA2 301 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 HCN2Q9UL51 889 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 TESMINQ9Y4I5 508 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 PCDHGA6Q9Y5G7 932 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 A3GALT2U3KPV4 340 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 KCNE1BA0A087WTH5 132 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 H3BQ06 376 aaPredicted RBP16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SPNP16150 400 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SPAM1P38567 509 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 MTAPQ13126 283 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 TIGD6Q17RP2 521 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SERPINA13PQ6UXR4 307 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 HSD11B1LQ7Z5J1 315 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 SLC22A15Q8IZD6 547 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 WFIKKN2Q8TEU8 576 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 PROX1Q92786 737 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 HRASLS5Q96KN8 279 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 PANX1Q96RD7 426 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 REXO4Q9GZR2 422 aaKnown RBP16.32■□□□□ 0.2
FOXA1-201ENST00000250448 KLHL3Q9UH77 587 aa16.32■□□□□ 0.2
FOXA1-201ENST00000250448 TRBV5-4A0A0C4DH59 114 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 PTTG1O95997 202 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 GGTA1PQ4G0N0 100 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 ATP13A5Q4VNC0 1218 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 TPRG1LQ5T0D9 272 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 Q6ZVL8 140 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 DPH2Q9BQC3 489 aaPredicted RBP16.31■□□□□ 0.2
FOXA1-201ENST00000250448 MBD1Q9UIS9 605 aaPredicted RBP16.31■□□□□ 0.2
FOXA1-201ENST00000250448 ASNA1O43681 348 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 MTX2O75431 263 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 SRPRAP08240 638 aaKnown RBP16.31■□□□□ 0.2
FOXA1-201ENST00000250448 GPX2P18283 190 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 RCVRNP35243 200 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 ETV3P41162 512 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 PNCKQ6P2M8 343 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 PARS2Q7L3T8 475 aaKnown RBP16.31■□□□□ 0.2
FOXA1-201ENST00000250448 CPA6Q8N4T0 437 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 AMER2Q8N7J2 671 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 LYSMD1Q96S90 227 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 WRAP53Q9BUR4 548 aaKnown RBP16.31■□□□□ 0.2
FOXA1-201ENST00000250448 NXF2Q9GZY0 626 aaKnown RBP16.31■□□□□ 0.2
FOXA1-201ENST00000250448 TTYH1Q9H313 450 aaPredicted RBP16.31■□□□□ 0.2
FOXA1-201ENST00000250448 PRDM8Q9NQV8 689 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 ARL15Q9NXU5 204 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 PSORS1C1Q9UIG5 152 aa16.31■□□□□ 0.2
FOXA1-201ENST00000250448 VIPP01282 170 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms