RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CTNNB1P35222 781 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 EIF1P41567 113 aaKnown RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 CASP6P55212 293 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 WNT7BP56706 349 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 FGL1Q08830 312 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 PTPRRQ15256 657 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 TEAD4Q15561 434 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 KLHL22Q53GT1 634 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 CERCAMQ5T4B2 595 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 KDM4DQ6B0I6 523 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 NADSYN1Q6IA69 706 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 DLK2Q6UY11 383 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 GCNT7Q6ZNI0 430 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 STPG2Q8N412 459 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 ZNF655Q8N720 491 aaPredicted RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 OR5B17Q8NGF7 314 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 SLC13A3Q8WWT9 602 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 ZC3HAV1LQ96H79 300 aaKnown RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 MRGPRX2Q96LB1 330 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 ERMAPQ96PL5 475 aaPredicted RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 SIGLEC11Q96RL6 698 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 TMEM175Q9BSA9 504 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 REG4Q9BYZ8 158 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 CD244Q9BZW8 370 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 NIF3L1Q9GZT8 377 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 MID1IP1Q9NPA3 183 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 ZFP64Q9NPA5 681 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 BABAM2Q9NXR7 383 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 KLHL8Q9P2G9 620 aaPredicted RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 ZNF69Q9UC07 566 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 PSORS1C1Q9UIG5 152 aa7.65□□□□□ -1.19
VPS11-209ENST00000622309 MBD1Q9UIS9 605 aaPredicted RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 NDRG4Q9ULP0 352 aaKnown RBP7.65□□□□□ -1.19
VPS11-209ENST00000622309 TRBV23-1A0A0A0MS06 115 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 A0A1W2PQL4 384 aaPredicted RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 CLCA1A8K7I4 914 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 CITO14578 2027 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 CD3EAPO15446 510 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 IFNA4P05014 189 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 CLTBP09497 229 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 OR56A5P0C7T3 313 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 DNASE1P24855 282 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 PRMT2P55345 433 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 UFM1P61960 85 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 MXD1Q05195 221 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 COTL1Q14019 142 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 SMAD2Q15796 467 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 LGALSLQ3ZCW2 172 aaPredicted RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 DDI2Q5TDH0 399 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 ZNF57Q68EA5 555 aaPredicted RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 ATRAIDQ6UW56 229 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 MOB2Q70IA6 237 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 RAB11FIP2Q7L804 512 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 KRT74Q7RTS7 529 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 OR11H4Q8NGC9 324 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 ZBTB18Q99592 522 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 MGLLQ99685 303 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 GSTO2Q9H4Y5 243 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 ELAC1Q9H777 363 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 GORASP2Q9H8Y8 452 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 PHF11Q9UIL8 331 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 IKZF3Q9UKT9 509 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 CLEC4AQ9UMR7 237 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 NDRG2Q9UN36 371 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 RBBP6Q7Z6E9 1792 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 ASPDHA6ND91 283 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 FAM74A7A6NL05 159 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 H3BM21 787 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 AZIN1O14977 448 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 LDLRAD4O15165 306 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 DHFRP00374 187 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 ADRB1P08588 477 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 TPH1P17752 444 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 XPAP23025 273 aaPredicted RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 S100PP25815 95 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 SLC19A1P41440 591 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 DAPP51397 102 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 AFF1P51825 1210 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 TAS2R39P59534 338 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 EEF1A1P68104 462 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 EEF1A2Q05639 463 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 SPP2Q13103 211 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 CTBP1Q13363 440 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 SPDYE7PQ495Y7 208 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 FAM74A3Q4VXF1 159 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 SEZ6Q53EL9 994 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 PABPC1L2AQ5JQF8 200 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 NBPF12Q5TAG4 269 aaPredicted RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 EEF1A1P5Q5VTE0 462 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 SLC27A4Q6P1M0 643 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 ZNF367Q7RTV3 350 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 SLC16A13Q7RTY0 426 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 ENTHD1Q8IYW4 607 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 Q8N402 240 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 ATP6V1C2Q8NEY4 427 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 MRPL48Q96GC5 212 aaKnown RBP7.64□□□□□ -1.19
VPS11-209ENST00000622309 MYOCQ99972 504 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 APOL2Q9BQE5 337 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 SLC29A3Q9BZD2 475 aa7.64□□□□□ -1.19
VPS11-209ENST00000622309 BARHL1Q9BZE3 327 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms