RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 ADGRF3Q8IZF5 1079 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 NAGSQ8N159 534 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 SMPDL3AQ92484 453 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 STARD8Q92502 1023 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 CAMK1GQ96NX5 476 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ABCG4Q9H172 646 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 WASH6PQ9NQA3 447 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 SCHIP1Q9P0W5 487 aaPredicted RBP13.85□□□□□ -0.19
VRK3-217ENST00000599538 SPASTQ9UBP0 616 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ACSL5Q9ULC5 683 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ABCG2Q9UNQ0 655 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 MYO10Q9HD67 2058 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 PRR19A6NJB7 356 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 G3V2T6 193 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 RNASET2O00584 256 aaKnown RBP13.85□□□□□ -0.19
VRK3-217ENST00000599538 STATHP02808 62 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 RPN2P04844 631 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ETS2P15036 469 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 PTX3P26022 381 aaPredicted RBP13.85□□□□□ -0.19
VRK3-217ENST00000599538 AQP1P29972 269 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 KDELR2P33947 212 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ALDH3A2P51648 485 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 LAPTM4AQ15012 233 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 RGNQ15493 299 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 CNPY1Q3B7I2 92 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 SDE2Q6IQ49 451 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 KIAA1161Q6NSJ0 714 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 SPESP1Q6UW49 350 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ZDHHC13Q8IUH4 622 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 KRT78Q8N1N4 520 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ZNF786Q8N393 782 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 SYNPOQ8N3V7 929 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 VPS37AQ8NEZ2 397 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ABHD11Q8NFV4 315 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 TSPAN14Q8NG11 270 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 JPH3Q8WXH2 748 aaPredicted RBP13.85□□□□□ -0.19
VRK3-217ENST00000599538 RMND5BQ96G75 393 aaPredicted RBP13.85□□□□□ -0.19
VRK3-217ENST00000599538 BARD1Q99728 777 aaKnown RBP13.85□□□□□ -0.19
VRK3-217ENST00000599538 TRIM4Q9C037 500 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 MYNNQ9NPC7 610 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 MYRFQ9Y2G1 1151 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 DGKBQ9Y6T7 804 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 PIAS3Q9Y6X2 628 aa13.85□□□□□ -0.19
VRK3-217ENST00000599538 ANKDD1BA6NHY2 528 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 GPR89AB7ZAQ6 455 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 GNGT2O14610 69 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 GCM2O75603 506 aaPredicted RBP13.84□□□□□ -0.19
VRK3-217ENST00000599538 EML2O95834 649 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 GPR89BP0CG08 455 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 C7P10643 843 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 HOXB3P14651 431 aaPredicted RBP13.84□□□□□ -0.19
VRK3-217ENST00000599538 ACSL1P33121 698 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 MAP7Q14244 749 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 C10orf62Q5T681 223 aaPredicted RBP13.84□□□□□ -0.19
VRK3-217ENST00000599538 DEPDC1Q5TB30 811 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 ANXA8L1Q5VT79 327 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 TMEM92Q6UXU6 159 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 ZDHHC21Q8IVQ6 265 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 AMER3Q8N944 861 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 OR2A1Q8NGT9 310 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 OR5AK3PQ8NH89 298 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 UBE2E3Q969T4 207 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 PPCDCQ96CD2 204 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 SIPA1Q96FS4 1042 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 MS4A8Q9BY19 250 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 BHLHE41Q9C0J9 482 aaPredicted RBP13.84□□□□□ -0.19
VRK3-217ENST00000599538 RHBGQ9H310 441 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 MAGIXQ9H6Y5 334 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 LHX9Q9NQ69 397 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 LMCD1Q9NZU5 365 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 PNMA8BQ9ULN7 279 aaPredicted RBP13.84□□□□□ -0.19
VRK3-217ENST00000599538 TSC22D4Q9Y3Q8 395 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 A0A0G2JN53 185 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 PDZK1P1A8MUH7 402 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 hCG_2039718K7EN88 272 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 ETFAP13804 333 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 DCTP40126 519 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 CSNK1G2P78368 415 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 VLDLRP98155 873 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 KHDRBS2Q5VWX1 349 aaKnown RBP13.84□□□□□ -0.19
VRK3-217ENST00000599538 ANGPTL8Q6UXH0 198 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 USP51Q70EK9 711 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 ZCCHC7Q8N3Z6 543 aaKnown RBP13.84□□□□□ -0.19
VRK3-217ENST00000599538 SMRP1Q8NCR6 262 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 UCN3Q969E3 161 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 PDXPQ96GD0 296 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 MRGPRX1Q96LB2 322 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 MUS81Q96NY9 551 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 MACROD1Q9BQ69 325 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 AIF1LQ9BQI0 150 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 TIMM29Q9BSF4 260 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 SLC6A16Q9GZN6 736 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 AICDAQ9GZX7 198 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 PELI2Q9HAT8 420 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 C8orf4Q9NR00 106 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 SPATA7Q9P0W8 599 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 TAAR2Q9P1P5 351 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 C5AR2Q9P296 337 aa13.84□□□□□ -0.19
VRK3-217ENST00000599538 TMEM229AB2RXF0 380 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms