RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 FCRLBQ6BAA4 426 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 CAPN13Q6MZZ7 669 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ANKRD37Q7Z713 158 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 FJX1Q86VR8 437 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 IFT20Q8IY31 132 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 MFSD9Q8NBP5 474 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 OR5T3Q8NGG3 340 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 MOCOSQ96EN8 888 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 OR4K3Q96R72 315 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 RBBP8Q99708 897 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 POPDC3Q9HBV1 291 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ARL15Q9NXU5 204 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 NINJ2Q9NZG7 142 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 C19orf25Q9UFG5 118 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-202ENST00000597453 IKZF3Q9UKT9 509 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 ABCA12Q86UK0 2595 aa14.29□□□□□ -0.12
TGFB1-202ENST00000597453 RRP9O43818 475 aaKnown RBP14.28□□□□□ -0.12
TGFB1-202ENST00000597453 PRAMEF2O60811 474 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 DNAJB6O75190 326 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 CYC1P08574 325 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 HIST1H2AGP0C0S8 130 aaPredicted RBP14.28□□□□□ -0.12
TGFB1-202ENST00000597453 HIST1H2ADP20671 130 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 MST1P26927 711 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 PHBP35232 272 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 GRK3P35626 688 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 PER3P56645 1201 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 TAS2R39P59534 338 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 AP2B1P63010 937 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 POU4F1Q01851 419 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 ZRSR2Q15696 482 aaKnown RBP14.28□□□□□ -0.12
TGFB1-202ENST00000597453 BTBD16Q32M84 506 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 PLAG1Q6DJT9 500 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 CTAGE3PQ8IX95 158 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 AFAP1L2Q8N4X5 818 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 LRRN4CLQ8ND94 238 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 ABHD11Q8NFV4 315 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 OR56A3Q8NH54 315 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 PEX11GQ96HA9 241 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 PDLIM5Q96HC4 596 aaKnown RBP14.28□□□□□ -0.12
TGFB1-202ENST00000597453 HIST1H2AHQ96KK5 128 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 GPR22Q99680 433 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 HIST1H2AJQ99878 128 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 HAUS8Q9BT25 410 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 H2AFJQ9BTM1 129 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 SPNS1Q9H2V7 528 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 CDC42EP4Q9H3Q1 356 aaKnown RBP14.28□□□□□ -0.12
TGFB1-202ENST00000597453 STMN3Q9NZ72 180 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 SLC22A7Q9Y694 548 aa14.28□□□□□ -0.12
TGFB1-202ENST00000597453 PCNX1Q96RV3 2341 aa14.27□□□□□ -0.12
TGFB1-202ENST00000597453 NDUFS4O43181 175 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 MAN1A2O60476 641 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 CDC123O75794 336 aaPredicted RBP14.27□□□□□ -0.13
TGFB1-202ENST00000597453 RASAL1O95294 804 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 B3GALT4O96024 378 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 RHOXF2BP0C7M4 288 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 SLC35G6P0C7Q6 338 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 ST13P50502 369 aaKnown RBP14.27□□□□□ -0.13
TGFB1-202ENST00000597453 CCR8P51685 355 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 PMP22Q01453 160 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 RHAGQ02094 409 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 CATSPEREQ5SY80 951 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 GRTP1Q5TC63 336 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 H3F3CQ6NXT2 135 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 TMEM207Q6UWW9 146 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 BEST3Q8N1M1 668 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 NKAPQ8N5F7 415 aaKnown RBP14.27□□□□□ -0.13
TGFB1-202ENST00000597453 PPM1NQ8N819 430 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 ZNF740Q8NDX6 193 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 OR4K1Q8NGD4 311 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 ANKRD7Q92527 254 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 TSLPQ969D9 159 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 NPAS2Q99743 824 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 RHOXF2Q9BQY4 288 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 SARGQ9BW04 601 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 FUT8Q9BYC5 575 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 LANCL2Q9NS86 450 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 ABI3Q9P2A4 366 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 TEKT2Q9UIF3 430 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 NFU1Q9UMS0 254 aa14.27□□□□□ -0.13
TGFB1-202ENST00000597453 A0A1B0GUH1 482 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 OR1F1O43749 312 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 WISP2O76076 250 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 UNC5CO95185 931 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 GUCA1CO95843 209 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 SAT1P21673 171 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 SPRP35270 261 aaPredicted RBP14.26□□□□□ -0.13
TGFB1-202ENST00000597453 AGTR2P50052 363 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 SLC12A2P55011 1212 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 AP1S2P56377 157 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 OLR1P78380 273 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 ZNF460Q14592 562 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 ABRAXAS2Q15018 415 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 EFTUD2Q15029 972 aaKnown RBP eCLIP14.26□□□□□ -0.13
TGFB1-202ENST00000597453 ZKSCAN8Q15776 578 aaPredicted RBP14.26□□□□□ -0.13
TGFB1-202ENST00000597453 SFT2D3Q587I9 215 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 ACER2Q5QJU3 275 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 PAPD4Q6PIY7 484 aaKnown RBP14.26□□□□□ -0.13
TGFB1-202ENST00000597453 SBSNQ6UWP8 590 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 GFRALQ6UXV0 394 aa14.26□□□□□ -0.13
TGFB1-202ENST00000597453 MTERF4Q7Z6M4 381 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms