RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 TBX6O95947 436 aaPredicted RBP12.29□□□□□ -0.44
LIG1-212ENST00000596549 CCDC166P0CW27 439 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 SMIM10L1P0DMW3 83 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 AGTR2P50052 363 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 HNMTP50135 292 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 TNFSF10P50591 281 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 SLC12A2P55011 1212 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 RAB8AP61006 207 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 ARG2P78540 354 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 RGS1Q08116 209 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 DLG1Q12959 904 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 BTBD16Q32M84 506 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 PLAG1Q6DJT9 500 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 C3orf62Q6ZUJ4 267 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 CYS1Q717R9 158 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 CMC1Q7Z7K0 106 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 CCDC25Q86WR0 208 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 PDPRQ8NCN5 879 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 PRR7Q8TB68 274 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 SSC4DQ8WTU2 575 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 METTL21AQ8WXB1 218 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 ESAMQ96AP7 390 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 SMIM10Q96HG1 83 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 NPAS2Q99743 824 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 AIF1LQ9BQI0 150 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 KLHL31Q9H511 634 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 COPG2Q9UBF2 871 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 C19orf25Q9UFG5 118 aaPredicted RBP12.29□□□□□ -0.44
LIG1-212ENST00000596549 ERRFI1Q9UJM3 462 aaPredicted RBP12.29□□□□□ -0.44
LIG1-212ENST00000596549 UTP11Q9Y3A2 253 aaKnown RBP12.29□□□□□ -0.44
LIG1-212ENST00000596549 ASB1Q9Y576 335 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 KCNE2Q9Y6J6 123 aa12.29□□□□□ -0.44
LIG1-212ENST00000596549 ANKUB1A6NFN9 424 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 MAGEB17A8MXT2 336 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 CHST10O43529 356 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 WDPCPO95876 746 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 FHP07954 510 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 GSTA2P09210 222 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 SLC35E2BP0CK96 405 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 GP1BBP13224 206 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 STMN1P16949 149 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 EPORP19235 508 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 CD22P20273 847 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 HNRNPH1P31943 449 aaKnown RBP12.28□□□□□ -0.44
LIG1-212ENST00000596549 HNF4AP41235 474 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 TDGF1P3P51864 188 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 RAB10P61026 200 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 SLC7A5Q01650 507 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 SLBPQ14493 270 aaKnown RBP eCLIP12.28□□□□□ -0.44
LIG1-212ENST00000596549 ABRAXAS2Q15018 415 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 TOR1AIP1Q5JTV8 583 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 RPUSD3Q6P087 351 aaKnown RBP12.28□□□□□ -0.44
LIG1-212ENST00000596549 PAPD4Q6PIY7 484 aaKnown RBP12.28□□□□□ -0.44
LIG1-212ENST00000596549 ABHD13Q7L211 337 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 VN1R5Q7Z5H4 357 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 CTAGE3PQ8IX95 158 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 TBC1D19Q8N5T2 526 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 PPM1NQ8N819 430 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 PLPP5Q8NEB5 264 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 FBF1Q8TES7 1133 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 HAS2Q92819 552 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 TSPAN17Q96FV3 270 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 UBXN10Q96LJ8 280 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 C16orf45Q96MC5 204 aaPredicted RBP12.28□□□□□ -0.44
LIG1-212ENST00000596549 TAAR6Q96RI8 345 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 SLX1AQ9BQ83 275 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 RNF32Q9H0A6 362 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 ZDHHC18Q9NUE0 388 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 WWOXQ9NZC7 414 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 TXNDC16Q9P2K2 825 aa12.28□□□□□ -0.44
LIG1-212ENST00000596549 PRRC2CQ9Y520 2896 aaKnown RBP12.28□□□□□ -0.44
LIG1-212ENST00000596549 USP9YO00507 2555 aaPredicted RBP12.27□□□□□ -0.44
LIG1-212ENST00000596549 DYTNA2CJ06 578 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 MAN1A2O60476 641 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 WFS1O76024 890 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 UQCRHP07919 91 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 C1GALT1C1LP0DN25 315 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 GNAZP19086 355 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 IL10P22301 178 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 STX2P32856 288 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 GGT5P36269 586 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 MAGEA4P43358 317 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 HSPA7P48741 367 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 GUCY2DQ02846 1103 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 CAV1Q03135 178 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 ZNF33BQ06732 778 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 ILF2Q12905 390 aaKnown RBP12.27□□□□□ -0.45
LIG1-212ENST00000596549 SLMAPQ14BN4 828 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 RBBP5Q15291 538 aaKnown RBP12.27□□□□□ -0.45
LIG1-212ENST00000596549 SFT2D3Q587I9 215 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 ZNF324BQ6AW86 544 aaPredicted RBP12.27□□□□□ -0.45
LIG1-212ENST00000596549 FCRLBQ6BAA4 426 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 H3F3CQ6NXT2 135 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 C8orf74Q6P047 294 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 TRPV3Q8NET8 790 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 OR1N1Q8NGS0 311 aa12.27□□□□□ -0.45
LIG1-212ENST00000596549 FAR1Q8WVX9 515 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms