RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 CHST4Q8NCG5 386 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 TRIM8Q9BZR9 551 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 PCDHGA2Q9Y5H1 932 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 MYH14Q7Z406 1995 aaKnown RBP9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 COL16A1Q07092 1604 aaPredicted RBP9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 AQP12BA6NM10 295 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 ASNA1O43681 348 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 IL1RNP18510 177 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 HNRNPA2B1P22626 353 aaKnown RBP9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 RNF144AP50876 292 aaPredicted RBP9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 SLAMF1Q13291 335 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 MYBPC3Q14896 1274 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 C1orf189Q5VU69 101 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 KLHDC10Q6PID8 442 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 HMGN2P46Q86SG4 172 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 TMEM173Q86WV6 379 aaPredicted RBP9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 AQP12AQ8IXF9 295 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 CSNK1A1LQ8N752 337 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 OR5K1Q8NHB7 308 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 RIT1Q92963 219 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 TMEM125Q96AQ2 219 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 DNAJA3Q96EY1 480 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 SMIM14Q96QK8 99 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 MGME1Q9BQP7 344 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 ZBTB26Q9HCK0 441 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 SLC35C2Q9NQQ7 365 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 NFS1Q9Y697 457 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 COMMD3-BMI1R4GMX3 469 aa9.39□□□□□ -0.91
GPATCH8-205ENST00000587228 TYROBPO43914 113 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 SLC16A8O95907 504 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 DBIP07108 87 aaKnown RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 DNAJB1P25685 340 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 ABHD18Q0P651 414 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 PUM1Q14671 1186 aaKnown RBP eCLIP9.38□□□□□ -0.912e-6■■■□□ 14.9
GPATCH8-205ENST00000587228 ZNF789Q5FWF6 425 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 CATSPEREQ5SY80 951 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 OR4N5Q8IXE1 308 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 KRTCAP2Q8N6L1 136 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 ARFGAP1Q8N6T3 406 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 DENND1AQ8TEH3 1009 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 GEMIN6Q8WXD5 167 aaKnown RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 COX4I2Q96KJ9 171 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 ZNF317Q96PQ6 595 aaPredicted RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 REEP4Q9H6H4 257 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 LDAHQ9H6V9 325 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 IL17CQ9P0M4 197 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 DNMT3BQ9UBC3 853 aaKnown RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 PDE10AQ9Y233 779 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 OARD1Q9Y530 152 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 IRAK3Q9Y616 596 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 OR52A4PA6NMU1 304 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 CAPN14A8MX76 684 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 PSMD9O00233 223 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 SLC30A4O14863 429 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 AURKAO14965 403 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 TNFRSF21O75509 655 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 RSL1D1O76021 490 aaKnown RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 RENP00797 406 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 MPC1LP0DKB6 136 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 VLDLRP98155 873 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 GRB7Q14451 532 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 LAPTM4AQ15012 233 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 UNC50Q53HI1 259 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 LIPJQ5W064 366 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 SLCO6A1Q86UG4 719 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 OR52E4Q8NGH9 312 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 OR2AJ1Q8NGZ0 328 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 RHEBL1Q8TAI7 183 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 ASB9Q96DX5 294 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 KCNC2Q96PR1 638 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 RANBP9Q96S59 729 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 COPS4Q9BT78 406 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 RHCGQ9UBD6 479 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 TRPM3Q9HCF6 1732 aaPredicted RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 DAPL1A0PJW8 107 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 PLOD3O60568 738 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 C9P02748 559 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 CD9P21926 228 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 GDI2P50395 445 aaKnown RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 GALK1P51570 392 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 TRAP1Q12931 704 aaKnown RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 SIX1Q15475 284 aaPredicted RBP9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 DENND5AQ6IQ26 1287 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 PAQR9Q6ZVX9 377 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 HTR3DQ70Z44 454 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 C12orf40Q86WS4 652 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 SLC30A8Q8IWU4 369 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 KLHL6Q8WZ60 621 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 SLC22A12Q96S37 553 aa9.38□□□□□ -0.91
GPATCH8-205ENST00000587228 H0YGN5 161 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 BLOC1S5-TXNDC5H3BN57 136 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 NPC1O15118 1278 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 CREG1O75629 220 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 CBLP22681 906 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 ACVR2AP27037 513 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 SUOXP51687 545 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 DNAJB13P59910 316 aa9.37□□□□□ -0.91
GPATCH8-205ENST00000587228 OR4D1Q15615 310 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms