RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 UTP15Q8TED0 518 aaKnown RBP18.41■□□□□ 0.54
SREBF1-220ENST00000581707 CREB3L4Q8TEY5 395 aa18.41■□□□□ 0.54
SREBF1-220ENST00000581707 EXT2Q93063 718 aa18.41■□□□□ 0.54
SREBF1-220ENST00000581707 ESAMQ96AP7 390 aa18.41■□□□□ 0.54
SREBF1-220ENST00000581707 PEX11GQ96HA9 241 aa18.41■□□□□ 0.54
SREBF1-220ENST00000581707 OR1F2PQ96R84 312 aa18.41■□□□□ 0.54
SREBF1-220ENST00000581707 C19orf25Q9UFG5 118 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-220ENST00000581707 ACOT9Q9Y305 439 aa18.41■□□□□ 0.54
SREBF1-220ENST00000581707 SHANK1Q9Y566 2161 aa18.41■□□□□ 0.54
SREBF1-220ENST00000581707 CLGNO14967 610 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 CHST10O43529 356 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 VPS4BO75351 444 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 B3GALT4O96024 378 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 ICAM2P13598 275 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 RAB8AP61006 207 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 HYAL2Q12891 473 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 BMPR2Q13873 1038 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 SLBPQ14493 270 aaKnown RBP eCLIP18.4■□□□□ 0.54
SREBF1-220ENST00000581707 PRR30Q53SZ7 412 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-220ENST00000581707 TMIGD1Q6UXZ0 262 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 LINC00696Q6ZRV3 163 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 RIPOR1Q6ZS17 1223 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 LANCL3Q6ZV70 420 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 CPEB2Q7Z5Q1 589 aaKnown RBP18.4■□□□□ 0.54
SREBF1-220ENST00000581707 CCDC91Q7Z6B0 441 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 IQCKQ8N0W5 287 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 KRT78Q8N1N4 520 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 SNX31Q8N9S9 440 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 TTLQ8NG68 377 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 IMMP1LQ96LU5 166 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 LMF1Q96S06 567 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 FMO2Q99518 471 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 WDR77Q9BQA1 342 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-220ENST00000581707 TUBB6Q9BUF5 446 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 KLHL31Q9H511 634 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 ACSS3Q9H6R3 686 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 EPS8L2Q9H6S3 715 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 IGSF5Q9NSI5 407 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 MAP10Q9P2G4 905 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 VPS4AQ9UN37 437 aa18.4■□□□□ 0.54
SREBF1-220ENST00000581707 HMX2A2RU54 273 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 DNAJB6O75190 326 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 AGTR2P50052 363 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 AP2B1P63010 937 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 MFAP5Q13361 173 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 CRB2Q5IJ48 1285 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 TOR1AIP1Q5JTV8 583 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 UBAP2Q5T6F2 1119 aaKnown RBP18.39■□□□□ 0.53
SREBF1-220ENST00000581707 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.39■□□□□ 0.53
SREBF1-220ENST00000581707 GALNT11Q8NCW6 608 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 DNAJB14Q8TBM8 379 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 BRIX1Q8TDN6 353 aaKnown RBP18.39■□□□□ 0.53
SREBF1-220ENST00000581707 PPP4R1Q8TF05 950 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 PSMF1Q92530 271 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 TBC1D20Q96BZ9 403 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 NXNL1Q96CM4 212 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 TRIM44Q96DX7 344 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-220ENST00000581707 RBCK1Q9BYM8 510 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 CD244Q9BZW8 370 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 PITHD1Q9GZP4 211 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-220ENST00000581707 CDC42EP4Q9H3Q1 356 aaKnown RBP18.39■□□□□ 0.53
SREBF1-220ENST00000581707 EHD1Q9H4M9 534 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 NT5DC2Q9H857 520 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 CLK4Q9HAZ1 481 aaKnown RBP18.39■□□□□ 0.53
SREBF1-220ENST00000581707 LANCL2Q9NS86 450 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 NUDT4Q9NZJ9 180 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 CSAG2Q9Y5P2 127 aa18.39■□□□□ 0.53
SREBF1-220ENST00000581707 LRRK2Q5S007 2527 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 A0A087X1B8 175 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 IGHV3-20A0A0C4DH32 117 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 SUPT3HB4E1H0 165 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 CCNT2O60583 730 aaKnown RBP18.38■□□□□ 0.53
SREBF1-220ENST00000581707 KERAO60938 352 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 SUPT3HO75486 399 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 CDC123O75794 336 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-220ENST00000581707 WFS1O76024 890 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 SEC24DO94855 1032 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-220ENST00000581707 ACSL3O95573 720 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 C2P06681 752 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 FHP07954 510 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 CELA2AP08217 269 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 SMIM10L1P0DMW3 83 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 GSTM2P28161 218 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 STXBP1P61764 594 aaKnown RBP18.38■□□□□ 0.53
SREBF1-220ENST00000581707 OLR1P78380 273 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 RHAGQ02094 409 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 ABRAXAS2Q15018 415 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 NSDHLQ15738 373 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 PDK4Q16654 411 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 FAM83EQ2M2I3 478 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 XKR6Q5GH73 641 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 ANKRD37Q7Z713 158 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 CUZD1Q86UP6 607 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 CISD2Q8N5K1 135 aaKnown RBP18.38■□□□□ 0.53
SREBF1-220ENST00000581707 PLPP5Q8NEB5 264 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 KCTD4Q8WVF5 259 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 SNRNP40Q96DI7 357 aaKnown RBP18.38■□□□□ 0.53
SREBF1-220ENST00000581707 SMIM10Q96HG1 83 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 ATOH8Q96SQ7 321 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 FUT8Q9BYC5 575 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms