RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 CPOXP36551 454 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 ZFP36L2P47974 494 aaKnown RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 DUSP3P51452 185 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 EMP3P54852 163 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 RGS1Q08116 209 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 DDX39BQ13838 428 aaKnown RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 NR0B2Q15466 257 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 PRMT9Q6P2P2 845 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 PAOXQ6QHF9 649 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 COMMD6Q7Z4G1 85 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 ADCK2Q7Z695 626 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 ARPINQ7Z6K5 226 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 NUDT13Q86X67 352 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 PLXDC1Q8IUK5 500 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 PGAM4Q8N0Y7 254 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 LIX1Q8N485 282 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 C1orf52Q8N6N3 182 aaKnown RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 OR2L5Q8NG80 312 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 OR8J2Q8NGG1 315 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 GAL3ST3Q96A11 431 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 MTFMTQ96DP5 389 aaKnown RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 SPDL1Q96EA4 605 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 KCNC2Q96PR1 638 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 PRPF18Q99633 342 aaKnown RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 C1orf50Q9BV19 199 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 CLK4Q9HAZ1 481 aaKnown RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 RXFP3Q9NSD7 469 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 GID8Q9NWU2 228 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 LRIT1Q9P2V4 623 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 GIMAP2Q9UG22 337 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 LEF1Q9UJU2 399 aaPredicted RBP11.89□□□□□ -0.51
TSEN54-204ENST00000577197 PADI4Q9UM07 663 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 DLGAP4Q9Y2H0 992 aa11.89□□□□□ -0.51
TSEN54-204ENST00000577197 GOLGA4Q13439 2230 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 ADAMTS9Q9P2N4 1935 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 RALGAPA1Q6GYQ0 2036 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 IGHV1OR21-1A0A087WYE8 117 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 EME2A4GXA9 379 aaPredicted RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 C4orf47A7E2U8 309 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 MAP3K7O43318 606 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 PCDH7O60245 1069 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 LCMT2O60294 686 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 ANXA4P09525 319 aaPredicted RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 CD59P13987 128 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 BSGP35613 385 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 HPCAL1P37235 193 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 SKP1P63208 163 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 YBX1P67809 324 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 RAE1P78406 368 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 FCRL6Q6DN72 434 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 PRSS42Q7Z5A4 293 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 ASPGQ86U10 573 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 EID2Q8N6I1 236 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 C19orf47Q8N9M1 422 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 RBM15BQ8NDT2 890 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 MARK4Q96L34 752 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 ZNF285Q96NJ3 590 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 NRTNQ99748 197 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 HOPXQ9BPY8 73 aaPredicted RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 TBC1D10AQ9BXI6 508 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 ZNF717Q9BY31 904 aaPredicted RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 NLNQ9BYT8 704 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 REXO4Q9GZR2 422 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 FAM120CQ9NX05 1096 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 EHD3Q9NZN3 535 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 MAN2B2Q9Y2E5 1009 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 AP3M1Q9Y2T2 418 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 GMEB1Q9Y692 573 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 RNF215Q9Y6U7 377 aa11.88□□□□□ -0.51
TSEN54-204ENST00000577197 MDC1Q14676 2089 aaKnown RBP11.88□□□□□ -0.51
TSEN54-204ENST00000577197 LOC100653049A0A140TA62 436 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 CCDC154A6NI56 674 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 TRIM38O00635 465 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 PLPP1O14494 284 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 SIGLEC6O43699 453 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 KRT34O76011 436 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 ZBTB11O95625 1053 aaPredicted RBP11.87□□□□□ -0.51
TSEN54-204ENST00000577197 TGFB1P01137 390 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 PGRP06401 933 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 ANKRD34CP0C6C1 535 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 CDH3P22223 829 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 RAP1GDS1P52306 607 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 UFM1P61960 85 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 HYAL2Q12891 473 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 PDE7AQ13946 482 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 PTGR1Q14914 329 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 MMEL1Q495T6 779 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 ADNP2Q6IQ32 1131 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 C8orf82Q6P1X6 216 aaPredicted RBP11.87□□□□□ -0.51
TSEN54-204ENST00000577197 FBXO42Q6P3S6 717 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 TRIM40Q6P9F5 258 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 ABHD17CQ6PCB6 329 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 GK5Q6ZS86 529 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 VN1R4Q7Z5H5 301 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 OR9I1Q8NGQ6 314 aa11.87□□□□□ -0.51
TSEN54-204ENST00000577197 WDR48Q8TAF3 677 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms