RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 ACTN3Q08043 901 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 MEP1AQ16819 746 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 RNASEH2BQ5TBB1 312 aaKnown RBP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 ADNP2Q6IQ32 1131 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 TRMT10BQ6PF06 316 aaKnown RBP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 CCDC137Q6PK04 289 aaKnown RBP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 LCTLQ6UWM7 567 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 Q6ZPB1 254 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 GDF7Q7Z4P5 450 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 RASGEF1CQ8N431 466 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 CAMKVQ8NCB2 501 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 MCUQ8NE86 351 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 NFAM1Q8NET5 270 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 ELP5Q8TE02 316 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 NEIL2Q969S2 332 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 EBNA1BP2Q99848 306 aaKnown RBP11.27□□□□□ -0.61
PRPF8-215ENST00000576958 PARVBQ9HBI1 364 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 LRFN1Q9P244 771 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 KLHL42Q9P2K6 505 aa11.27□□□□□ -0.61
PRPF8-215ENST00000576958 A0A0G2JMM0 328 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 A0A1W2PPB8 328 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 A0A1W2PRS3 328 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 PINLYPA6NC86 204 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 KIR3DP1A8MWS1 328 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 MAGEB17A8MXT2 336 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 CDC7O00311 574 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 ASNA1O43681 348 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 NME2P1O60361 137 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 SLC25A12O75746 678 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 NME2P22392 152 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 GMPRP36959 345 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 GPR85P60893 370 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 FBXO48Q5FWF7 155 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 SLC25A25Q6KCM7 469 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 RPTNQ6XPR3 784 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 MDGA2Q7Z553 956 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 RPS19BP1Q86WX3 136 aaKnown RBP11.26□□□□□ -0.61
PRPF8-215ENST00000576958 PLPP5Q8NEB5 264 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 OR4K1Q8NGD4 311 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 OR56A3Q8NH54 315 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 MCOLN3Q8TDD5 553 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 UTP15Q8TED0 518 aaKnown RBP11.26□□□□□ -0.61
PRPF8-215ENST00000576958 TBC1D20Q96BZ9 403 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 MTFMTQ96DP5 389 aaKnown RBP11.26□□□□□ -0.61
PRPF8-215ENST00000576958 SNF8Q96H20 258 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 PTCHD1Q96NR3 888 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 LPAR4Q99677 370 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 XAB2Q9HCS7 855 aaKnown RBP11.26□□□□□ -0.61
PRPF8-215ENST00000576958 ARL15Q9NXU5 204 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 C19orf25Q9UFG5 118 aaPredicted RBP11.26□□□□□ -0.61
PRPF8-215ENST00000576958 TEKT2Q9UIF3 430 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 PPP2R2CQ9Y2T4 447 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 CLDN16Q9Y5I7 305 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 PSAT1Q9Y617 370 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 SLC22A7Q9Y694 548 aa11.26□□□□□ -0.61
PRPF8-215ENST00000576958 MTORP42345 2549 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 IGKV3D-11A0A0A0MRZ8 115 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 A0A1B0GTH9 108 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 NKX2-6A6NCS4 301 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 NPEPPSL1A6NEC2 478 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 G3V3Y1 287 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 SLC16A5O15375 505 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 HS6ST1O60243 411 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 PDE9AO76083 593 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 CLDN14O95500 239 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 C8GP07360 202 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 CCDC175P0C221 793 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 ABOP16442 354 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 ALOX12P18054 663 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 GDF5P43026 501 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 SCTRP47872 440 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 AGTR2P50052 363 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 MLF1P58340 268 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 SARNPP82979 210 aaKnown RBP11.25□□□□□ -0.61
PRPF8-215ENST00000576958 RBPJQ06330 500 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 RUNX2Q13950 521 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 EXT1Q16394 746 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 CYP1B1Q16678 543 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 TOR1AIP1Q5JTV8 583 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 HECTD2Q5U5R9 776 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 PCGF5Q86SE9 256 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 CA13Q8N1Q1 262 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 MYO1HQ8N1T3 1032 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 GPATCH11Q8N954 259 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 ABHD11Q8NFV4 315 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 MAIP1Q8WWC4 291 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 NRGNQ92686 78 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 CFAP36Q96G28 342 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 FAM167BQ9BTA0 163 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 DEPPQ9NTK1 212 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 TNFRSF10DQ9UBN6 386 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 EML6Q6ZMW3 1958 aa11.25□□□□□ -0.61
PRPF8-215ENST00000576958 ZNF407Q9C0G0 2248 aa11.24□□□□□ -0.61
PRPF8-215ENST00000576958 ZNF469Q96JG9 3925 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-215ENST00000576958 TRBC2A0A5B9 178 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms