RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 LHX9Q9NQ69 397 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 FARSBQ9NSD9 589 aaKnown RBP17.1■□□□□ 0.33
COMMD4-222ENST00000568034 PPT2Q9UMR5 302 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 TIMM22Q9Y584 194 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 SLC22A7Q9Y694 548 aa17.1■□□□□ 0.33
COMMD4-222ENST00000568034 FOXE1O00358 373 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-222ENST00000568034 MANBAO00462 879 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 TERTO14746 1132 aaKnown RBP17.09■□□□□ 0.33
COMMD4-222ENST00000568034 LYPLA1O75608 230 aaPredicted RBP17.09■□□□□ 0.33
COMMD4-222ENST00000568034 ONECUT2O95948 504 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 B3GALT4O96024 378 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 CHN1P15882 459 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 IL1RNP18510 177 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 NR1D1P20393 614 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 PCBP4P57723 403 aaKnown RBP17.09■□□□□ 0.33
COMMD4-222ENST00000568034 RPS13P62277 151 aaKnown RBP17.09■□□□□ 0.33
COMMD4-222ENST00000568034 CLN3Q13286 438 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 DDX39BQ13838 428 aaKnown RBP17.09■□□□□ 0.33
COMMD4-222ENST00000568034 FAM198BQ6UWH4 519 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 COX15Q7KZN9 410 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 UBE3DQ7Z6J8 389 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 SHISA5Q8N114 240 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 ESX1Q8N693 406 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 SREK1Q8WXA9 508 aaKnown RBP17.09■□□□□ 0.33
COMMD4-222ENST00000568034 CCT6BQ92526 530 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 NKD1Q969G9 470 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 GAL3ST3Q96A11 431 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 MVB12AQ96EY5 273 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 SORT1Q99523 831 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 SLC7A5P2Q9GIP4 190 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 MED4Q9NPJ6 270 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 TXLNGQ9NUQ3 528 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 ADGRE2Q9UHX3 823 aa17.09■□□□□ 0.33
COMMD4-222ENST00000568034 A0A0A6YYC8 382 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-222ENST00000568034 TMEM114B3SHH9 223 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 I3L1I5 382 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-222ENST00000568034 TGFB1P01137 390 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 PDYNP01213 254 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF888P0CJ79 500 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-222ENST00000568034 ALOX12P18054 663 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 ALAS2P22557 587 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 STAT5AP42229 794 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 OR1D4P47884 311 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 RAB8AP61006 207 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 STXBP1P61764 594 aaKnown RBP17.08■□□□□ 0.32
COMMD4-222ENST00000568034 BST1Q10588 318 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 NDUFA9Q16795 377 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 C10orf62Q5T681 223 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-222ENST00000568034 FAM199XQ6PEV8 388 aaPredicted RBP17.08■□□□□ 0.32
COMMD4-222ENST00000568034 CACNA2D3Q8IZS8 1091 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 OR9A4Q8NGU2 314 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 PPP1R14CQ8TAE6 165 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 METTL6Q8TCB7 284 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 MTFMTQ96DP5 389 aaKnown RBP17.08■□□□□ 0.32
COMMD4-222ENST00000568034 F2RL3Q96RI0 385 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 HBEGFQ99075 208 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 CHST8Q9H2A9 424 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 OR51B5Q9H339 312 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 ELOVL6Q9H5J4 265 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 PSD3Q9NYI0 1048 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 SNX6Q9UNH7 406 aa17.08■□□□□ 0.32
COMMD4-222ENST00000568034 LOC101059948A0A1B0GTJ6 334 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 TMEM233B4DJY2 109 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 TAF4O00268 1085 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 AZIN1O14977 448 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 GALR3O60755 368 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 SH3BGRLO75368 114 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 KLHL18O94889 574 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 NSA2O95478 260 aaKnown RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 FGF4P08620 206 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 GRK2P25098 689 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 SERPINB3P29508 390 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 HMOX2P30519 316 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 ABCE1P61221 599 aaKnown RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 ABHD18Q0P651 414 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 IFT88Q13099 833 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 NKAIN1Q4KMZ8 207 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 SGO1Q5FBB7 561 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 DEPDC1Q5TB30 811 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 KHDRBS2Q5VWX1 349 aaKnown RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 KANK2Q63ZY3 851 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 TTC19Q6DKK2 380 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 CLEC6AQ6EIG7 209 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 PRMT9Q6P2P2 845 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 ABHD17CQ6PCB6 329 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 AMER3Q8N944 861 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 OR2L5Q8NG80 312 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 CT55Q8WUE5 264 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 SELENOMQ8WWX9 145 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 MR1Q95460 341 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 CMTM7Q96FZ5 175 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 QRFPRQ96P65 431 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 DPH2Q9BQC3 489 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF717Q9BY31 904 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 REXO4Q9GZR2 422 aaKnown RBP17.07■□□□□ 0.32
COMMD4-222ENST00000568034 NDOR1Q9UHB4 597 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 ZDHHC2Q9UIJ5 367 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 PADI1Q9ULC6 663 aa17.07■□□□□ 0.32
COMMD4-222ENST00000568034 MAU2Q9Y6X3 613 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms