RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	SULT1C3	Q6IMI6	304 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	SLCO4C1	Q6ZQN7	724 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	ABHD13	Q7L211	337 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	ANKRD37	Q7Z713	158 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	GPSM1	Q86YR5	675 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	CTAGE3P	Q8IX95	158 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	KLHDC8A	Q8IYD2	350 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	TCAIM	Q8N3R3	496 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	SPATA6L	Q8N4H0	392 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	AFAP1L2	Q8N4X5	818 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	SIRT6	Q8N6T7	355 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	PLPP5	Q8NEB5	264 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	CATSPER1	Q8NEC5	780 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	MYRIP	Q8NFW9	859 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	OR1N1	Q8NGS0	311 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	PRR7	Q8TB68	274 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	BRIX1	Q8TDN6	353 aa	Known RBP	6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	PSMF1	Q92530	271 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	HAS2	Q92819	552 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	RHBDF1	Q96CC6	855 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	CNDP1	Q96KN2	507 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	GPR22	Q99680	433 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	RBBP8	Q99708	897 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	BARD1	Q99728	777 aa	Known RBP	6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	CAPS2	Q9BXY5	557 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	PHACTR1	Q9C0D0	580 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	CNOT10	Q9H9A5	744 aa	Known RBP	6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	CLK4	Q9HAZ1	481 aa	Known RBP	6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	LRRC4C	Q9HCJ2	640 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	AGPAT4	Q9NRZ5	378 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	STMN3	Q9NZ72	180 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	PTGFRN	Q9P2B2	879 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	C19orf25	Q9UFG5	118 aa	Predicted RBP	6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	PCDHGA10	Q9Y5H3	936 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	CSAG2	Q9Y5P2	127 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	NIN	Q8N4C6	2090 aa		6.53	□□□□□ -1.36
SF3B3-209	ENST00000567635	FREM3	P0C091	2139 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	NCF1B	A6NI72	391 aa	Predicted RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	NCF1C	A8MVU1	366 aa	Predicted RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	MAGEB17	A8MXT2	336 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	CLGN	O14967	610 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	TAPBP	O15533	448 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	PHGDH	O43175	533 aa	Known RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	DNAJB6	O75190	326 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	STK16	O75716	305 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	FAM155B	O75949	473 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	URI1	O94763	535 aa	Predicted RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	WDR47	O94967	919 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	AGFG2	O95081	481 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	S100B	P04271	92 aa	Predicted RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ZNF888	P0CJ79	500 aa	Predicted RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	SMIM10L1	P0DMW3	83 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	MYBL2	P10244	700 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ITGAM	P11215	1152 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	NCF1	P14598	390 aa	Predicted RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	CRABP2	P29373	138 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	STX2	P32856	288 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	SOX11	P35716	441 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	GGT5	P36269	586 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	HNF4A	P41235	474 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	TSFM	P43897	325 aa	Known RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	SLC6A12	P48065	614 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	EFNA3	P52797	238 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	RAB10	P61026	200 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ARG2	P78540	354 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	RHAG	Q02094	409 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	GUCY2D	Q02846	1103 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	MRPL49	Q13405	166 aa	Known RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	NAB1	Q13506	487 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ELOA	Q14241	798 aa	Known RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ABRAXAS2	Q15018	415 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	NR6A1	Q15406	480 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	TGFBI	Q15582	683 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	EIF2S3L	Q2VIR3	472 aa	Known RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	BTBD16	Q32M84	506 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	C18orf21	Q32NC0	220 aa	Predicted RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	KBTBD12	Q3ZCT8	623 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ABHD17B	Q5VST6	288 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	PLAG1	Q6DJT9	500 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	RPUSD3	Q6P087	351 aa	Known RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ZDHHC24	Q6UX98	284 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	LANCL3	Q6ZV70	420 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	TMPRSS11B	Q86T26	416 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	SHISA5	Q8N114	240 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	KRT78	Q8N1N4	520 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	PPM1N	Q8N819	430 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	ANKRD53	Q8N9V6	530 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	TTL	Q8NG68	377 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	OR5T3	Q8NGG3	340 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	STAG3L4	Q8TBR4	150 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	M1AP	Q8TC57	530 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	UTP15	Q8TED0	518 aa	Known RBP	6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	FBF1	Q8TES7	1133 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	CREB3L4	Q8TEY5	395 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	KIAA1191	Q96A73	305 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	TBC1D20	Q96BZ9	403 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	PEX11G	Q96HA9	241 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	SMIM10	Q96HG1	83 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	UBXN10	Q96LJ8	280 aa		6.52	□□□□□ -1.37
SF3B3-209	ENST00000567635	OR1F2P	Q96R84	312 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms