RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 HAS2Q92819 552 aa15.89■□□□□ 0.13
CLK3-210ENST00000563112 RHBDF1Q96CC6 855 aa15.89■□□□□ 0.13
CLK3-210ENST00000563112 GPR22Q99680 433 aa15.89■□□□□ 0.13
CLK3-210ENST00000563112 UNKQ9C0B0 810 aaKnown RBP15.89■□□□□ 0.13
CLK3-210ENST00000563112 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLK3-210ENST00000563112 PLA2G3Q9NZ20 509 aa15.89■□□□□ 0.13
CLK3-210ENST00000563112 WWOXQ9NZC7 414 aa15.89■□□□□ 0.13
CLK3-210ENST00000563112 NTNG1Q9Y2I2 539 aa15.89■□□□□ 0.13
CLK3-210ENST00000563112 HIVEP3Q5T1R4 2406 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 IGHV3-20A0A0C4DH32 117 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 CHST10O43529 356 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 S100BP04271 92 aaPredicted RBP15.88■□□□□ 0.13
CLK3-210ENST00000563112 FHP07954 510 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 SERPINA6P08185 405 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 C1GALT1C1LP0DN25 315 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 GP1BBP13224 206 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 STX2P32856 288 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 HNF4AP41235 474 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 GDF5P43026 501 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 SLC6A12P48065 614 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 GPX6P59796 221 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 RAB10P61026 200 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 EXT1Q16394 746 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 BTBD16Q32M84 506 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 CDKL4Q5MAI5 379 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 PLAG1Q6DJT9 500 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 FAM180AQ6UWF9 173 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 ZNF572Q7Z3I7 529 aaPredicted RBP15.88■□□□□ 0.13
CLK3-210ENST00000563112 KLHDC8AQ8IYD2 350 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 KRT78Q8N1N4 520 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 SPATA6LQ8N4H0 392 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 ANKRD53Q8N9V6 530 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 TTLQ8NG68 377 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 OR5T3Q8NGG3 340 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 SUN3Q8TAQ9 357 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 UTP15Q8TED0 518 aaKnown RBP15.88■□□□□ 0.13
CLK3-210ENST00000563112 SSC4DQ8WTU2 575 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 TBC1D20Q96BZ9 403 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 BARD1Q99728 777 aaKnown RBP15.88■□□□□ 0.13
CLK3-210ENST00000563112 RBCK1Q9BYM8 510 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 STMN3Q9NZ72 180 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 SCN2AQ99250 2005 aa15.88■□□□□ 0.13
CLK3-210ENST00000563112 OR2W5A6NFC9 320 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 A8MUI8 341 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 MAGEB17A8MXT2 336 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 PSMD12O00232 456 aaPredicted RBP15.87■□□□□ 0.13
CLK3-210ENST00000563112 CLGNO14967 610 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 CDC123O75794 336 aaPredicted RBP15.87■□□□□ 0.13
CLK3-210ENST00000563112 CD1DP15813 335 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 TNFSF10P50591 281 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 RAB8AP61006 207 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 STXBP1P61764 594 aaKnown RBP15.87■□□□□ 0.13
CLK3-210ENST00000563112 OLR1P78380 273 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 ZNF33BQ06732 778 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 NAB1Q13506 487 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 ABRAXAS2Q15018 415 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 C18orf21Q32NC0 220 aaPredicted RBP15.87■□□□□ 0.13
CLK3-210ENST00000563112 KBTBD12Q3ZCT8 623 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 SFT2D3Q587I9 215 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 TOR1AIP1Q5JTV8 583 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 SULT1C3Q6IMI6 304 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 C8orf74Q6P047 294 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 TMIGD1Q6UXZ0 262 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 RAPH1Q70E73 1250 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 M1APQ8TC57 530 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 GRHL3Q8TE85 626 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 FBF1Q8TES7 1133 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 FAR1Q8WVX9 515 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 FAR2Q96K12 515 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 ZNF354BQ96LW1 612 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 MAGEB10Q96LZ2 347 aaPredicted RBP15.87■□□□□ 0.13
CLK3-210ENST00000563112 PSMG3-AS1Q96PY0 264 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 LPAR4Q99677 370 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 SLC6A16Q9GZN6 736 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 RNF32Q9H0A6 362 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 KCNK13Q9HB14 408 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 LANCL2Q9NS86 450 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 DNAJC11Q9NVH1 559 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 GPRC5BQ9NZH0 403 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 CD274Q9NZQ7 290 aa15.87■□□□□ 0.13
CLK3-210ENST00000563112 SEMA7AO75326 666 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 STK16O75716 305 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 WISP3O95389 354 aaPredicted RBP15.86■□□□□ 0.13
CLK3-210ENST00000563112 DDAH2O95865 285 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 RNH1P13489 461 aaKnown RBP15.86■□□□□ 0.13
CLK3-210ENST00000563112 GSTM2P28161 218 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 HPDP32754 393 aaPredicted RBP15.86■□□□□ 0.13
CLK3-210ENST00000563112 GGT5P36269 586 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 OR4D2P58180 307 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 RHAGQ02094 409 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 SLBPQ14493 270 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLK3-210ENST00000563112 SLMAPQ14BN4 828 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 ZKSCAN8Q15776 578 aaPredicted RBP15.86■□□□□ 0.13
CLK3-210ENST00000563112 PAPD4Q6PIY7 484 aaKnown RBP15.86■□□□□ 0.13
CLK3-210ENST00000563112 ZDHHC24Q6UX98 284 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 SLCO4C1Q6ZQN7 724 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 SHISA5Q8N114 240 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 BCORP1Q8N888 145 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 ST6GALNAC3Q8NDV1 305 aa15.86■□□□□ 0.13
CLK3-210ENST00000563112 CCT6BQ92526 530 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms