RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TFEBP19484 476 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 GGT5P36269 586 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 HNF4AP41235 474 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 EFNA3P52797 238 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 DLG1Q12959 904 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 SLBPQ14493 270 aaKnown RBP eCLIP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 PCOLCEQ15113 449 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 GLE1Q53GS7 698 aaKnown RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 PRR30Q53SZ7 412 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 TOR1AIP1Q5JTV8 583 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 CDKL4Q5MAI5 379 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 UBAP2Q5T6F2 1119 aaKnown RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 MROH9Q5TGP6 573 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 NIPAL1Q6NVV3 410 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 TMEM205Q6UW68 189 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 SLCO4C1Q6ZQN7 724 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 CISD2Q8N5K1 135 aaKnown RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 PDPRQ8NCN5 879 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 OR5T3Q8NGG3 340 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 STAG3L4Q8TBR4 150 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 PEX11GQ96HA9 241 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 CNDP1Q96KN2 507 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 FMO2Q99518 471 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 WDR77Q9BQA1 342 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 CAPS2Q9BXY5 557 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 ZNF700Q9H0M5 742 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 TSPYL1Q9H0U9 437 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 CDC42EP4Q9H3Q1 356 aaKnown RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 SLC24A3Q9HC58 644 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 DNAJC11Q9NVH1 559 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 GPRC5BQ9NZH0 403 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 NUDT4Q9NZJ9 180 aa11.89□□□□□ -0.51
LRRC28-214ENST00000559433 C19orf25Q9UFG5 118 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 COPG1Q9Y678 874 aaKnown RBP11.89□□□□□ -0.51
LRRC28-214ENST00000559433 A0A087X1B8 175 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 DYTNA2CJ06 578 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 OR2W5A6NFC9 320 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 CLGNO14967 610 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 CCNT2O60583 730 aaKnown RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 KERAO60938 352 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 CDC123O75794 336 aaPredicted RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 ACSL3O95573 720 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 B3GALT4O96024 378 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 SERPINA7P05543 415 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 PRR35P0CG20 571 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 MYBL2P10244 700 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 GNLYP22749 145 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 RAB8AP61006 207 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 OLR1P78380 273 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 ACTN3Q08043 901 aaPredicted RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 ELOAQ14241 798 aaKnown RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 PDK4Q16654 411 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 FHL5Q5TD97 284 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 ISLR2Q6UXK2 745 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 TMIGD1Q6UXZ0 262 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 LINC00696Q6ZRV3 163 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 LANCL3Q6ZV70 420 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 CPEB2Q7Z5Q1 589 aaKnown RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 RELL1Q8IUW5 271 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 KRT78Q8N1N4 520 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 TTLQ8NG68 377 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 BRIX1Q8TDN6 353 aaKnown RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 UTP15Q8TED0 518 aaKnown RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 CREB3L4Q8TEY5 395 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 PPP4R1Q8TF05 950 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 KCTD4Q8WVF5 259 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 CCT6BQ92526 530 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 ESAMQ96AP7 390 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 OR1F2PQ96R84 312 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 LMF1Q96S06 567 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 TUBB6Q9BUF5 446 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 SLC6A16Q9GZN6 736 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 EHD1Q9H4M9 534 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 KLHL31Q9H511 634 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 SNX15Q9NRS6 342 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 AGPAT4Q9NRZ5 378 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 IGSF5Q9NSI5 407 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 PTGFRNQ9P2B2 879 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 PTBP2Q9UKA9 531 aaKnown RBP11.88□□□□□ -0.51
LRRC28-214ENST00000559433 ACOT9Q9Y305 439 aa11.88□□□□□ -0.51
LRRC28-214ENST00000559433 CNTRLQ7Z7A1 2325 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 IGHV3-20A0A0C4DH32 117 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 UBXN8O00124 270 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 CHST10O43529 356 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 SEC24DO94855 1032 aaPredicted RBP11.87□□□□□ -0.51
LRRC28-214ENST00000559433 AGFG2O95081 481 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 FHP07954 510 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 SERPINA6P08185 405 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 CELA2AP08217 269 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 IL10P22301 178 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 ECHS1P30084 290 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 KCNC1P48547 511 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 AGTR2P50052 363 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 SERPINB8P50452 374 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 STXBP1P61764 594 aaKnown RBP11.87□□□□□ -0.51
LRRC28-214ENST00000559433 ARG2P78540 354 aa11.87□□□□□ -0.51
LRRC28-214ENST00000559433 IRF9Q00978 393 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms