RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 DLG1Q12959 904 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 NAB1Q13506 487 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 EFTUD2Q15029 972 aaKnown RBP eCLIP8.29□□□□□ -1.086e-8■■■■□ 23.5
SNRPA1-206ENST00000558059 HERC3Q15034 1050 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 UBAP2Q5T6F2 1119 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 PRAMEF9Q5VWM5 478 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 SLCO4C1Q6ZQN7 724 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 FRA10AC1Q70Z53 315 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 CMC1Q7Z7K0 106 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 TMPRSS11BQ86T26 416 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 CUZD1Q86UP6 607 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 ATCAYQ86WG3 371 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 GPSM1Q86YR5 675 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 KBTBD2Q8IY47 623 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 ZADH2Q8N4Q0 377 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 TBC1D19Q8N5T2 526 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 NOA1Q8NC60 698 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 GALNT11Q8NCW6 608 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 OR5T3Q8NGG3 340 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 UTP15Q8TED0 518 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 CREB3L4Q8TEY5 395 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 TM9SF4Q92544 642 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 KIAA1191Q96A73 305 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 SNRNP40Q96DI7 357 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 C19orf60Q96EN9 201 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 IMMP1LQ96LU5 166 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 LMF1Q96S06 567 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 WDR77Q9BQA1 342 aaPredicted RBP8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 AIF1LQ9BQI0 150 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 TMEM79Q9BSE2 394 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 SLC6A16Q9GZN6 736 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 AICDAQ9GZX7 198 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 KLHL31Q9H511 634 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 LANCL2Q9NS86 450 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 NAALAD2Q9Y3Q0 740 aa8.29□□□□□ -1.08
SNRPA1-206ENST00000558059 NBPF19A0A087WUL8 3843 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 IGHV3-20A0A0C4DH32 117 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 HMX2A2RU54 273 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 C4orf51C9J302 202 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 CHST10O43529 356 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 SERPIND1P05546 499 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 SERPINA6P08185 405 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 ZNF888P0CJ79 500 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 SLC35E2BP0CK96 405 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 C8orf89P0DMQ9 161 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 C1GALT1C1LP0DN25 315 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 GNAZP19086 355 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 GNLYP22749 145 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 RHAGQ02094 409 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 CDC16Q13042 620 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 MFAP5Q13361 173 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 UBAP2LQ14157 1087 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 RBBP5Q15291 538 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 MINDY4Q4G0A6 757 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 DEFB134Q4QY38 66 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 FBXO48Q5FWF7 155 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 LCE2AQ5TA79 106 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 IRAK1BP1Q5VVH5 260 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 SULT1C3Q6IMI6 304 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 MYO7BQ6PIF6 2116 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 ISLR2Q6UXK2 745 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 LIAT1Q6ZQX7 453 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 LINC00696Q6ZRV3 163 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 RIPOR1Q6ZS17 1223 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 LANCL3Q6ZV70 420 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 CPEB2Q7Z5Q1 589 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 ISCA2Q86U28 154 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 RELL1Q8IUW5 271 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 IQCKQ8N0W5 287 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 TCAIMQ8N3R3 496 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 CISD2Q8N5K1 135 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 PDPRQ8NCN5 879 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 PLPP5Q8NEB5 264 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 TRPV3Q8NET8 790 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 BRIX1Q8TDN6 353 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 PPP4R1Q8TF05 950 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 METTL21AQ8WXB1 218 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 ZNF592Q92610 1267 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 ESAMQ96AP7 390 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 PEX11GQ96HA9 241 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 OR1F2PQ96R84 312 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 BARD1Q99728 777 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 TUBB6Q9BUF5 446 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 ILKAPQ9H0C8 392 aaPredicted RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 IGSF5Q9NSI5 407 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 DNAJC11Q9NVH1 559 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 RIC8BQ9NVN3 520 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 NINJ2Q9NZG7 142 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 COPG2Q9UBF2 871 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 PTBP2Q9UKA9 531 aaKnown RBP8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 NTNG1Q9Y2I2 539 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 PCNX1Q96RV3 2341 aa8.28□□□□□ -1.08
SNRPA1-206ENST00000558059 TCP11X1B4DZS4 312 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 VPS4BO75351 444 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 H2AFYO75367 372 aaKnown RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 STK16O75716 305 aa8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 SEC24DO94855 1032 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 TBX6O95947 436 aaPredicted RBP8.27□□□□□ -1.09
SNRPA1-206ENST00000558059 ITGAMP11215 1152 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms