RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 FHP07954 510 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 ZNF888P0CJ79 500 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-210ENST00000557431 ENO3P13929 434 aaPredicted RBP13.2□□□□□ -0.3
SLIRP-210ENST00000557431 AGAP20933 346 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 MAOAP21397 527 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 NME2P22392 152 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 HNF4AP41235 474 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 MEOX1P50221 254 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 TAS2R50P59544 299 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 GPR85P60893 370 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 CATSPEREQ5SY80 951 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 C4orf22Q6V702 233 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 MFSD9Q8NBP5 474 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 FAM98AQ8NCA5 519 aaKnown RBP13.2□□□□□ -0.3
SLIRP-210ENST00000557431 CHTF18Q8WVB6 975 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 PTCHD1Q96NR3 888 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 SERPINB12Q96P63 405 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 RHBGQ9H310 441 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 TRMT6Q9UJA5 497 aaKnown RBP13.2□□□□□ -0.3
SLIRP-210ENST00000557431 FBXO5Q9UKT4 447 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
SLIRP-210ENST00000557431 MPDZO75970 2070 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 A0A1B0GTH9 108 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 HS6ST1O60243 411 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 GALR3O60755 368 aaPredicted RBP13.19□□□□□ -0.3
SLIRP-210ENST00000557431 PDE9AO76083 593 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 MLYCDO95822 493 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 TSPAN12O95859 305 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 SLC35G6P0C7Q6 338 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 MLF1P58340 268 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 RAB8AP61006 207 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 CDK16Q00536 496 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 PAQR3Q6TCH7 311 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 LCTLQ6UWM7 567 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 CA5BP1Q8WTZ4 195 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 NRGNQ92686 78 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 TBC1D20Q96BZ9 403 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 OR4K3Q96R72 315 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 SGPP1Q9BX95 441 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 UCK2Q9BZX2 261 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 ENKD1Q9H0I2 346 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 NECTIN3Q9NQS3 549 aa13.19□□□□□ -0.3
SLIRP-210ENST00000557431 TACC2O95359 2948 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 A0A0G2JN53 185 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 E9PLN8 166 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 PRRG2O14669 202 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 TFECO14948 347 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-210ENST00000557431 CYC1P08574 325 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 NPPBP16860 134 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 ALOX12P18054 663 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 MAGEA6P43360 314 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 CDKN2DP55273 166 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 DHX9Q08211 1270 aaKnown RBP13.18□□□□□ -0.3
SLIRP-210ENST00000557431 C16orf47Q6ZP98 133 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-210ENST00000557431 PCGF5Q86SE9 256 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 SULF2Q8IWU5 870 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 AFAP1L2Q8N4X5 818 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
SLIRP-210ENST00000557431 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 LINGO1Q96FE5 620 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 TSNARE1Q96NA8 513 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 OR1F2PQ96R84 312 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 SPOCK3Q9BQ16 436 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 VKORC1Q9BQB6 163 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 AICDAQ9GZX7 198 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 KLHL31Q9H511 634 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 LIN28AQ9H9Z2 209 aaKnown RBP13.18□□□□□ -0.3
SLIRP-210ENST00000557431 MCCC2Q9HCC0 563 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 NPDC1Q9NQX5 325 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-210ENST00000557431 KLHL42Q9P2K6 505 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 IKZF3Q9UKT9 509 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 SLC22A7Q9Y694 548 aa13.18□□□□□ -0.3
SLIRP-210ENST00000557431 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
SLIRP-210ENST00000557431 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-210ENST00000557431 TRBV11-1A0A0K0K1C0 115 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 SAGE2PA6NJ88 616 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 SDR42E2A6NKP2 422 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 SLC16A5O15375 505 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 GUCA1CO95843 209 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 HRH2P25021 359 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 GABRB3P28472 473 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 PPP2R1BP30154 601 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 PTGS2P35354 604 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 GRK3P35626 688 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 CYB561P49447 251 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
SLIRP-210ENST00000557431 CMPK2Q5EBM0 449 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 MDGA2Q7Z553 956 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 CCDC71Q8IV32 467 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-210ENST00000557431 MYO1HQ8N1T3 1032 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 ACBD4Q8NC06 268 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 NFAM1Q8NET5 270 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-210ENST00000557431 OR52N2Q8NGI0 321 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 UTP15Q8TED0 518 aaKnown RBP13.17□□□□□ -0.3
SLIRP-210ENST00000557431 MAIP1Q8WWC4 291 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 MS4A14Q96JA4 679 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms