RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CAPN13Q6MZZ7 669 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-221ENST00000556571 NIPAL1Q6NVV3 410 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 NEPROQ6NW34 567 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 ARHGAP11AQ6P4F7 1023 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 CYHR1Q6ZMK1 362 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 ACAD11Q709F0 780 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 CENPUQ71F23 418 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 SLC13A5Q86YT5 568 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-221ENST00000556571 CILP2Q8IUL8 1156 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 CHDHQ8NE62 594 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-221ENST00000556571 C16orf52Q8NHV5 167 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 CCDC138Q96M89 665 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 SLC30A3Q99726 388 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 FOXC2Q99958 501 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 CXXC4Q9H2H0 198 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 INTS10Q9NVR2 710 aaKnown RBP11.13□□□□□ -0.63
ACTN1-221ENST00000556571 SYBUQ9NX95 663 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 SCN3AQ9NY46 2000 aa11.13□□□□□ -0.63
ACTN1-221ENST00000556571 FEZF1A0PJY2 475 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF860A6NHJ4 632 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 LCMT2O60294 686 aaKnown RBP11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CDC40O60508 579 aaKnown RBP eCLIP11.12□□□□□ -0.63
ACTN1-221ENST00000556571 ZWINTO95229 277 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 PAMP19021 973 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 COILP38432 576 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-221ENST00000556571 TBPL1P62380 186 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CCZ1BP86790 482 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CCZ1P86791 482 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CDK16Q00536 496 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 FOLH1Q04609 750 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 MYBPHQ13203 477 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CUL1Q13616 776 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 ARMC3Q5W041 872 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF662Q6ZS27 426 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 UBE2R2Q712K3 238 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-221ENST00000556571 C17orf64Q86WR6 236 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 TGIF2LYQ8IUE0 185 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CLYBLQ8N0X4 340 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CYP4X1Q8N118 509 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 ARMC10Q8N2F6 343 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 AFAP1L2Q8N4X5 818 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 ZFP62Q8NB50 900 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-221ENST00000556571 MFSD9Q8NBP5 474 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 TRIM58Q8NG06 486 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 OR5T3Q8NGG3 340 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 GIMAP7Q8NHV1 300 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 KCNJ9Q92806 393 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 NINJ1Q92982 152 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 PTCHD1Q96NR3 888 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 DEFB126Q9BYW3 111 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CCDC68Q9H2F9 335 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 DHRS7Q9Y394 339 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 DNAJC13O75165 2243 aa11.12□□□□□ -0.63
ACTN1-221ENST00000556571 CTAGE9A4FU28 777 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 CHST10O43529 356 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 GALR3O60755 368 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-221ENST00000556571 B4GALT2O60909 372 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 FAM155BO75949 473 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 CCND1P24385 295 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 RFC3P40938 356 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 PPP2R2AP63151 447 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 PMPCAQ10713 525 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 CCNG2Q16589 344 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 PAOXQ6QHF9 649 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 CCDC71Q8IV32 467 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-221ENST00000556571 SEC16BQ96JE7 1060 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 CLK4Q9HAZ1 481 aaKnown RBP11.11□□□□□ -0.63
ACTN1-221ENST00000556571 MED16Q9Y2X0 877 aa11.11□□□□□ -0.63
ACTN1-221ENST00000556571 SAGE2PA6NJ88 616 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 EIF3FO00303 357 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 NDUFS4O43181 175 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ZSCAN12O43309 604 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 KLK8O60259 260 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 PDE9AO76083 593 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ALOX12P18054 663 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 KLK2P20151 261 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 TPSB2P20231 275 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 NUP107P57740 925 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 SARNPP82979 210 aaKnown RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 NAE1Q13564 534 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 PWP1Q13610 501 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 THOC5Q13769 683 aaKnown RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 TPSAB1Q15661 275 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 DEFB134Q4QY38 66 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 EMC4Q5J8M3 183 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF470Q6ECI4 717 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 DRICH1Q6PGQ1 229 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 AGTRAPQ6RW13 159 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 LCTLQ6UWM7 567 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 QSOX2Q6ZRP7 698 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 KIAA0408Q6ZU52 694 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 GSTA5Q7RTV2 222 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 PIWIL4Q7Z3Z4 852 aaKnown RBP11.1□□□□□ -0.63
ACTN1-221ENST00000556571 CYP4Z2PQ8N1L4 340 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 RPRMLQ8N4K4 120 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 TMEM156Q8N614 296 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ZNF740Q8NDX6 193 aa11.1□□□□□ -0.63
ACTN1-221ENST00000556571 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms