RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FHL3Q13643 280 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 DPYSQ14117 519 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 PRPSAP1Q14558 356 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 USP41Q3LFD5 358 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 TEDDM1Q5T9Z0 273 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 FAM171A1Q5VUB5 890 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 FUT10Q6P4F1 479 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 LRRC8BQ6P9F7 803 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 LRRC31Q6UY01 552 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 SLC39A5Q6ZMH5 540 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 LINC00523Q86TU6 105 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 ZNF280BQ86YH2 543 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 GPR65Q8IYL9 337 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 FSTL5Q8N475 847 aaPredicted RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 CAMKVQ8NCB2 501 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 FBXO36Q8NEA4 188 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 OR10T2Q8NGX3 314 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 PSMA8Q8TAA3 256 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 DQX1Q8TE96 717 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 DYDC1Q8WWB3 177 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 OVCA2Q8WZ82 227 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CDKL2Q92772 493 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 DPF1Q92782 380 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CASP10Q92851 521 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 HDAC11Q96DB2 347 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 MTBPQ96DY7 904 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CHMP6Q96FZ7 201 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 LINC00615Q96LM1 132 aaPredicted RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 FAM210AQ96ND0 272 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 DEFB118Q96PH6 123 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 XPO6Q96QU8 1125 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 SMC6Q96SB8 1091 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CLSTN3Q9BQT9 956 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 IARS2Q9NSE4 1012 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 DNAJC17Q9NVM6 304 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 SOHLH2Q9NX45 425 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 ARHGEF38Q9NXL2 777 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 IL37Q9NZH6 218 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 OR12D3Q9UGF7 316 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 VPS51Q9UID3 782 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 SERTAD3Q9UJW9 196 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 PRG3Q9Y2Y8 225 aaPredicted RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 WNT6Q9Y6F9 365 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CAPN7Q9Y6W3 813 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 NLRC5Q86WI3 1866 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 ATXN2Q99700 1313 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 TANC1Q9C0D5 1861 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 COL4A4P53420 1690 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 LOC105369274A0A096LPK9 316 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 LOC102723532A0A0G2JNH3 316 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 TEX13CA0A0J9YWL9 993 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 GXYLT2A0PJZ3 443 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 FAM92AA1XBS5 289 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 OOEPA6NGQ2 149 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 FAM47DPA6NHR8 397 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SDR42E2A6NKP2 422 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 CGB1A6NKQ9 187 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 POC1B-GALNT4F8VUJ3 575 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 GOLGA8MH3BSY2 632 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 I3L4J1 428 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 TM9SF1O15321 606 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SPRY1O43609 319 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 MFSD11O43934 449 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 ANXA9O76027 345 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 EPN2O95208 641 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 ZWINTO95229 277 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 IGLV3-25P01717 112 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 KLKB1P03952 638 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 GALTP07902 379 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SNRPAP09012 282 aaKnown RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 UROSP10746 265 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 ELK3P41970 407 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 MAGEA3P43357 314 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SLCO1A2P46721 670 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 PPP3CCP48454 512 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 NPY2RP49146 381 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SLC11A1P49279 550 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 PNLIPRP2P54317 469 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 NME5P56597 212 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 FAM3BP58499 235 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 SLC10A2Q12908 348 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 DNAJC3Q13217 504 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 EIF4EBP2Q13542 120 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 TMED2Q15363 201 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 TEX44Q53QW1 395 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 RAB6CQ53S08 254 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 PLAC9Q5JTB6 97 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 ARHGAP40Q5TG30 622 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 CACHD1Q5VU97 1274 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 OTUD1Q5VV17 481 aaPredicted RBP4.97□□□□□ -1.61
SRP54-211ENST00000556445 ANKRD22Q5VYY1 191 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 NAPEPLDQ6IQ20 393 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 LAYNQ6UX15 382 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 BHLHA9Q7RTU4 235 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 PID1Q7Z2X4 250 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 TAC4Q86UU9 113 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 EXOC3L1Q86VI1 746 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 SLC26A11Q86WA9 606 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 LRRC6Q86X45 466 aa4.97□□□□□ -1.61
SRP54-211ENST00000556445 CDH26Q8IXH8 852 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms