RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 NDOR1Q9UHB4 597 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 LGALS13Q9UHV8 139 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 EMCNQ9ULC0 261 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 TMCO1Q9UM00 188 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 CDC14AQ9UNH5 594 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 TNPO3Q9Y5L0 923 aaKnown RBP9.16□□□□□ -0.94
SRP54-210ENST00000556380 MAU2Q9Y6X3 613 aa9.16□□□□□ -0.94
SRP54-210ENST00000556380 A0A0A6YYC8 382 aaPredicted RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 H0YIG0 161 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 I3L1I5 382 aaPredicted RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 CLGNO14967 610 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 LILRA1O75019 489 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 NSA2O95478 260 aaKnown RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 SERPINA6P08185 405 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 RPS17P08708 135 aaKnown RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 CD63P08962 238 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 PIM1P11309 404 aaPredicted RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 EPB42P16452 691 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 CRHR1P34998 444 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 RHDQ02161 417 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 IRF8Q02556 426 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 CHIT1Q13231 466 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 SSPNQ14714 243 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 RBBP5Q15291 538 aaKnown RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 NDUFA9Q16795 377 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 ADPRMQ3LIE5 342 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 XKR6Q5GH73 641 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 ADNP2Q6IQ32 1131 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.15□□□□□ -0.94
SRP54-210ENST00000556380 IQCKQ8N0W5 287 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 RIBC1Q8N443 379 aaPredicted RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 TBC1D19Q8N5T2 526 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 TEX9Q8N6V9 391 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 TRPV3Q8NET8 790 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 OR9A4Q8NGU2 314 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 UTP15Q8TED0 518 aaKnown RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 WBP1Q96G27 269 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 SCYL1Q96KG9 808 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 CATSPER2Q96P56 530 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 BBC3Q96PG8 261 aaPredicted RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 EFCAB11Q9BUY7 163 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 ROPN1BQ9BZX4 212 aaPredicted RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 DRC3Q9H069 523 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 KLHL31Q9H511 634 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 ROPN1Q9HAT0 212 aaPredicted RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 ZBTB26Q9HCK0 441 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 OPTCQ9UBM4 332 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 DCDC2Q9UHG0 476 aa9.15□□□□□ -0.94
SRP54-210ENST00000556380 RALYQ9UKM9 306 aaKnown RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 PRRC2CQ9Y520 2896 aaKnown RBP9.15□□□□□ -0.94
SRP54-210ENST00000556380 ZNF462Q96JM2 2506 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 BSNQ9UPA5 3926 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 CDC14CA4D256 554 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 SLC35F4A4IF30 521 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 LRIT2A6NDA9 550 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 SMIM23A6NLE4 172 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 A8MT66 165 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 C4orf51C9J302 202 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 SGK494L7N484 410 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 OR7A17O14581 309 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 NDUFS4O43181 175 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 DLX3O60479 287 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 DNAJB6O75190 326 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 SMIM24O75264 130 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 CLEC3AO75596 197 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 ZGLP1P0C6A0 271 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 SLC35G6P0C7Q6 338 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 GSTM2P28161 218 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 EEF1DP29692 281 aaKnown RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 EFNA3P52797 238 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 LAPTM5Q13571 262 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 GTF2H2Q13888 395 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 DEFB109BQ30KR1 87 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 SOWAHCQ53LP3 525 aaPredicted RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 VWA2Q5GFL6 755 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 GTF2H2CQ6P1K8 395 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 GOLGA7Q7Z5G4 137 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 PPP1R32Q7Z5V6 425 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 LAS2Q8IYD9 372 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 KRT78Q8N1N4 520 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 EXD3Q8N9H8 876 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 L3MBTL4Q8NA19 623 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 LSM14AQ8ND56 463 aaKnown RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 TTLQ8NG68 377 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 STT3BQ8TCJ2 826 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 ZNF483Q8TF39 744 aaPredicted RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 THAP4Q8WY91 577 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 EXTL1Q92935 676 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 COL26A1Q96A83 441 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 PHF21BQ96EK2 531 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 MMABQ96EY8 250 aaPredicted RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 NSUN5Q96P11 429 aaKnown RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 IPPKQ9H8X2 491 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 RRAGDQ9NQL2 400 aaPredicted RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 ZNF282Q9UDV7 671 aaPredicted RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 GPN3Q9UHW5 284 aaPredicted RBP9.14□□□□□ -0.95
SRP54-210ENST00000556380 PCTPQ9UKL6 214 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 POLHQ9Y253 713 aa9.14□□□□□ -0.95
SRP54-210ENST00000556380 PADI2Q9Y2J8 665 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms