RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 AAR2Q9Y312 384 aaKnown RBP4.04□□□□□ -1.76
VTI1B-203ENST00000554636 PKP3Q9Y446 797 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SPTBP11277 2137 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SPTA1P02549 2419 aa4.04□□□□□ -1.76
VTI1B-203ENST00000554636 SEC16AO15027 2179 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 IGLV3-16A0A075B6K0 115 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 TRBV5-4A0A0C4DH59 114 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 GOLGA6L9A6NEM1 432 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 MGAT4DA6NG13 374 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 OR2AG2A6NM03 316 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 OR52A4PA6NMU1 304 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 C2orf81A6NN90 581 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 EFCAB7A8K855 629 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PDZK1P1A8MUH7 402 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 H7C0S8 307 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 CCL22O00626 93 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 STX7O15400 261 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 ZW10O43264 779 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 LIASO43766 372 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 RAD1O60671 282 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 KCNJ13O60928 360 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 POP7O75817 140 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 DNAJB5O75953 348 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 UBXN7O94888 489 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 VIPP01282 170 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 GRPP07492 148 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 HNRNPCP07910 306 aaKnown RBP eCLIP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PRSS56P0CW18 603 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 NDUFB7P17568 137 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 VCLP18206 1134 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 IDSP22304 550 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PBLDP30039 288 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 CSTF2P33240 577 aaKnown RBP eCLIP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 TNNT3P45378 269 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 MAPK9P45984 424 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 CAPZBP47756 277 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 LEPRP48357 1165 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 DRG2P55039 364 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 UCNP55089 124 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PPP1CAP62136 330 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 RHDQ02161 417 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PIN1Q13526 163 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 GPR18Q14330 331 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 NFE2L1Q14494 772 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 RPE65Q16518 533 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PARP6Q2NL67 630 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PLAC9Q5JTB6 97 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 ARHGAP40Q5TG30 622 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 KIAA1614Q5VZ46 1190 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 DUS1LQ6P1R4 473 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 WDR74Q6RFH5 385 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 DET1Q7L5Y6 550 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 MAVSQ7Z434 540 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PRSS42Q7Z5A4 293 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 SNX20Q7Z614 316 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PRUNE1Q86TP1 453 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 VASH2Q86V25 355 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 AMZ2Q86W34 360 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 GLIS1Q8NBF1 620 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 LSM14AQ8ND56 463 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 CCDC112Q8NEF3 446 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 OR52K1Q8NGK4 314 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 OR2L2Q8NH16 312 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 GDAP1Q8TB36 358 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 HM13Q8TCT9 377 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF398Q8TD17 642 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 JPH3Q8WXH2 748 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 NCSTNQ92542 709 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 ART4Q93070 314 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 ULK4Q96C45 1275 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 MTFMTQ96DP5 389 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 SGF29Q96ES7 293 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 LINC00615Q96LM1 132 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 C9orf72Q96LT7 481 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 TAAR9Q96RI9 348 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 TMEM121Q9BTD3 319 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 FRMD8P1Q9BZ68 369 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 SEMA4CQ9C0C4 833 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 FAM96AQ9H5X1 160 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 ASB8Q9H765 288 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 LRRC40Q9H9A6 602 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 APMAPQ9HDC9 416 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 NLE1Q9NVX2 485 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 PIH1D1Q9NWS0 290 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 AKAP7Q9P0M2 348 aaPredicted RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 SH3BP4Q9P0V3 963 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 SEMA5BQ9P283 1151 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 ZNF180Q9UJW8 692 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 SPENQ96T58 3664 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 BAHCC1Q9P281 2608 aa4.03□□□□□ -1.76
VTI1B-203ENST00000554636 SNRNP200O75643 2136 aaKnown RBP4.03□□□□□ -1.76
VTI1B-203ENST00000554636 FER1L5A0AVI2 2057 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 OR51F1A6NGY5 319 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 A8MU76 341 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 STMND1H3BQB6 276 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 KRT86O43790 486 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 KIF1CO43896 1103 aaKnown RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 KALRNO60229 2985 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 PROP1O75360 226 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms