RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TTLQ8NG68 377 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 PSMF1Q92530 271 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 HAS2Q92819 552 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 SNRNP40Q96DI7 357 aaKnown RBP8.24□□□□□ -1.09
ACTN1-213ENST00000554508 SEC16BQ96JE7 1060 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 UBXN10Q96LJ8 280 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 TSNARE1Q96NA8 513 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 OR1F2PQ96R84 312 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 BARD1Q99728 777 aaKnown RBP8.24□□□□□ -1.09
ACTN1-213ENST00000554508 MESP1Q9BRJ9 268 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 PITHD1Q9GZP4 211 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-213ENST00000554508 VN1R1Q9GZP7 353 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 CDC42EP4Q9H3Q1 356 aaKnown RBP8.24□□□□□ -1.09
ACTN1-213ENST00000554508 CAB39LQ9H9S4 337 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 AGPAT4Q9NRZ5 378 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 ASF1BQ9NVP2 202 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 NINJ2Q9NZG7 142 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 GPRC5BQ9NZH0 403 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 HCN3Q9P1Z3 774 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 MAP10Q9P2G4 905 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 PCDHGA10Q9Y5H3 936 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 POLEQ07864 2286 aa8.24□□□□□ -1.09
ACTN1-213ENST00000554508 SPTBN1Q01082 2364 aaKnown RBP8.24□□□□□ -1.09
ACTN1-213ENST00000554508 ICE1Q9Y2F5 2266 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 DYTNA2CJ06 578 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 MAGEB17A8MXT2 336 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 TCP11X1B4DZS4 312 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 CLGNO14967 610 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 PHGDHO43175 533 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 RDH16O75452 317 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 JRKO75564 520 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 PIAS1O75925 651 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 WDR47O94967 919 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 CBX6O95503 412 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 UQCRHP07919 91 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SERPINA6P08185 405 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SMIM10L1P0DMW3 83 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 GSTM2P28161 218 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 CRABP2P29373 138 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 HPDP32754 393 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 VSNL1P62760 191 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SNRPNP63162 240 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SRSF1Q07955 248 aaKnown RBP eCLIP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 CDC16Q13042 620 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 ZNF169Q14929 603 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 RBBP5Q15291 538 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 ZKSCAN8Q15776 578 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 KBTBD12Q3ZCT8 623 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 PRR30Q53SZ7 412 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 RPUSD3Q6P087 351 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SLCO4C1Q6ZQN7 724 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 CCDC91Q7Z6B0 441 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 ANKRD37Q7Z713 158 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 RELL1Q8IUW5 271 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 PPM1NQ8N819 430 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 ANKRD53Q8N9V6 530 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 STAG3L4Q8TBR4 150 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 BRIX1Q8TDN6 353 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 UTP15Q8TED0 518 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 KIAA1191Q96A73 305 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 TBC1D20Q96BZ9 403 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 MRRFQ96E11 262 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 MOCOSQ96EN8 888 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 C19orf60Q96EN9 201 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 PEX11GQ96HA9 241 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SMIM10Q96HG1 83 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 CNDP1Q96KN2 507 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 PARD6BQ9BYG5 372 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SLC6A16Q9GZN6 736 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 RNF32Q9H0A6 362 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 SPNS1Q9H2V7 528 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 EHD1Q9H4M9 534 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 NT5DC2Q9H857 520 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 NMRAL1Q9HBL8 299 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 WWOXQ9NZC7 414 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 PTGFRNQ9P2B2 879 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 TEKT2Q9UIF3 430 aa8.23□□□□□ -1.09
ACTN1-213ENST00000554508 DIDO1Q9BTC0 2240 aaKnown RBP8.23□□□□□ -1.09
ACTN1-213ENST00000554508 TRAV17A0A0B4J275 112 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 CCDC189A1A4V9 331 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 NCF1BA6NI72 391 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 NCF1CA8MVU1 366 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 TAPBPO15533 448 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 CHST10O43529 356 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 STK16O75716 305 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 S100BP04271 92 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 FHP07954 510 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 ZNF888P0CJ79 500 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 ITGAMP11215 1152 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 NCF1P14598 390 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 JAK1P23458 1154 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 GDF5P43026 501 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 UQCRFS1P47985 274 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 EFNA3P52797 238 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 STXBP1P61764 594 aaKnown RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 ARG2P78540 354 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 RHAGQ02094 409 aa8.22□□□□□ -1.09
ACTN1-213ENST00000554508 ACTN3Q08043 901 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-213ENST00000554508 HYAL2Q12891 473 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms