RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 UNC50Q53HI1 259 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 XKR7Q5GH72 579 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 AARS2Q5JTZ9 985 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 GPR107Q5VW38 600 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 SYPL2Q5VXT5 272 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TCEAL6Q6IPX3 200 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 UGT3A1Q6NUS8 523 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 DUS1LQ6P1R4 473 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TTC23LQ6PF05 361 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 KDELC1Q6UW63 502 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TUBA1AQ71U36 451 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 CCDC80Q76M96 950 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ISCA2Q86U28 154 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 C11orf74Q86VG3 221 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ANKRD13BQ86YJ7 626 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 HIPK1Q86Z02 1210 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 EPHX4Q8IUS5 362 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PHYKPLQ8IUZ5 450 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 LACC1Q8IV20 430 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 FUNDC1Q8IVP5 155 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 DENND6AQ8IWF6 608 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ZZZ3Q8IYH5 903 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 CENPSQ8N2Z9 138 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PARP8Q8N3A8 854 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF610Q8N9Z0 462 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 FAM156AQ8NDB6 213 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 OR56A4Q8NGH8 313 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 WDR48Q8TAF3 677 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TCEAL3Q969E4 200 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TMIGD2Q96BF3 282 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TUBGCP3Q96CW5 907 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RSPRY1Q96DX4 576 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PPP1R36Q96LQ0 422 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF599Q96NL3 588 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 SERPINB11Q96P15 392 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ACBD6Q9BR61 282 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 SCNM1Q9BWG6 230 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 MEGF9Q9H1U4 602 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 EHD1Q9H4M9 534 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 IFT22Q9H7X7 185 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RMND5AQ9H871 391 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PARVBQ9HBI1 364 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 MID1IP1Q9NPA3 183 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TMEM9BQ9NQ34 198 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ANLNQ9NQW6 1124 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 FBXO8Q9NRD0 319 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RBM22Q9NW64 420 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PIH1D1Q9NWS0 290 aaKnown RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 CMTM6Q9NX76 183 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TAS2R13Q9NYV9 303 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 FBXO10Q9UK96 956 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PDE10AQ9Y233 779 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TPRKBQ9Y3C4 175 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF711Q9Y462 761 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 NEUROG3Q9Y4Z2 214 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 NME7Q9Y5B8 376 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 DNAJC15Q9Y5T4 150 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 GPR45Q9Y5Y3 372 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 RALGAPA1Q6GYQ0 2036 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 VWA8A3KMH1 1905 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 PTPRDP23468 1912 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 TICRRQ7Z2Z1 1910 aa5.73□□□□□ -1.49
VPS33B-203ENST00000554264 MN1Q10571 1320 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-203ENST00000554264 SYNJ2BP-COX16A0A087WUM0 186 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 E2F8A0AVK6 867 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 LNP1A1A4G5 178 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 OR6C75A6NL08 312 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 F5H423 210 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TAF4O00268 1085 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 DFFAO00273 331 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PPEF2O14830 753 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PIP5K1BO14986 540 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 INPP4BO15327 924 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 UGT2B11O75310 529 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CDK14O94921 469 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 OAZ2O95190 189 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 APBB3O95704 486 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ALPLP05186 524 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 HLA-DQB2P05538 268 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 RPS17P08708 135 aaKnown RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ALDOCP09972 364 aaKnown RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ZNF37AP17032 561 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CAPN3P20807 821 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 DRD1P21728 446 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CRHBPP24387 322 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 PSMA3P25788 255 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 LMO2P25791 158 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CD40P25942 277 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CD40LGP29965 261 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 AKT1P31749 480 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MSX2P35548 267 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 STT3AP46977 705 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 BMXP51813 675 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 ARHGDIAP52565 204 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 MAP3K7CLP57077 242 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 YBEYP58557 167 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 YWHAHQ04917 246 aaPredicted RBP5.72□□□□□ -1.49
VPS33B-203ENST00000554264 IL10RBQ08334 325 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 CDC20Q12834 499 aa5.72□□□□□ -1.49
VPS33B-203ENST00000554264 TRAF2Q12933 501 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms