RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PHF19Q5T6S3 580 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 GLRX5Q86SX6 157 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 PARP9Q8IXQ6 854 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 RGMAQ96B86 450 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 MS4A6EQ96DS6 147 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 C11orf24Q96F05 449 aaPredicted RBP27.42■■□□□ 1.98
BRF1-213ENST00000548421 MARK4Q96L34 752 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 FCRL1Q96LA6 429 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 LRRC37BQ96QE4 947 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 AICDAQ9GZX7 198 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 KLHL31Q9H511 634 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 SIRT5Q9NXA8 310 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 ASIC5Q9NY37 505 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 EIF3LQ9Y262 564 aaKnown RBP27.42■■□□□ 1.98
BRF1-213ENST00000548421 RUVBL1Q9Y265 456 aaKnown RBP27.42■■□□□ 1.98
BRF1-213ENST00000548421 POLR3HQ9Y535 204 aaPredicted RBP27.42■■□□□ 1.98
BRF1-213ENST00000548421 FAM186AA6NE01 2351 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 URADA6NGE7 173 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 PLPP1O14494 284 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 FCHO1O14526 889 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 TXNDC9O14530 226 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 MYO1DO94832 1006 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 MAPK1P28482 360 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 ARFIP1P53367 373 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 HKDC1Q2TB90 917 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 CCDC157Q569K6 752 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 IL23RQ5VWK5 629 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 COMMD6Q7Z4G1 85 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 RCBTB1Q8NDN9 531 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 SRFBP1Q8NEF9 429 aaKnown RBP27.41■■□□□ 1.98
BRF1-213ENST00000548421 OR2L5Q8NG80 312 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 ZNF285Q96NJ3 590 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 SAR1AQ9NR31 198 aa27.41■■□□□ 1.98
BRF1-213ENST00000548421 IDO1P14902 403 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 DIO3P55073 304 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 IRX1P78414 480 aaPredicted RBP27.4■■□□□ 1.98
BRF1-213ENST00000548421 TGM3Q08188 693 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 GSTA3Q16772 222 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 TCTE1Q5JU00 501 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 WASHC2DQ5SRD0 308 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 NOXRED1Q6NXP6 359 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 TRIM40Q6P9F5 258 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 RBM44Q6ZP01 1051 aaKnown RBP27.4■■□□□ 1.98
BRF1-213ENST00000548421 KCT2Q8NC54 265 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 DEFB124Q8NES8 71 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 GAL3ST3Q96A11 431 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 MYLK2Q9H1R3 596 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 MRGBPQ9NV56 204 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 AIG1Q9NVV5 245 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 TOR4AQ9NXH8 423 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 GVINP1Q7Z2Y8 2422 aa27.4■■□□□ 1.98
BRF1-213ENST00000548421 ERI3O43414 337 aaKnown RBP27.39■■□□□ 1.98
BRF1-213ENST00000548421 ZFP36L1Q07352 338 aaKnown RBP27.39■■□□□ 1.98
BRF1-213ENST00000548421 GALNT18Q6P9A2 607 aa27.39■■□□□ 1.98
BRF1-213ENST00000548421 PAGE2Q7Z2X7 111 aa27.39■■□□□ 1.98
BRF1-213ENST00000548421 NETO1Q8TDF5 533 aa27.39■■□□□ 1.98
BRF1-213ENST00000548421 KCNC2Q96PR1 638 aa27.39■■□□□ 1.98
BRF1-213ENST00000548421 ZNF717Q9BY31 904 aaPredicted RBP27.39■■□□□ 1.98
BRF1-213ENST00000548421 ZNF385DQ9H6B1 395 aa27.39■■□□□ 1.98
BRF1-213ENST00000548421 FANCEQ9HB96 536 aa27.39■■□□□ 1.98
BRF1-213ENST00000548421 COPG1Q9Y678 874 aaKnown RBP27.39■■□□□ 1.98
BRF1-213ENST00000548421 RRP9O43818 475 aaKnown RBP27.38■■□□□ 1.97
BRF1-213ENST00000548421 FOLR1P15328 257 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 TIA1P31483 386 aaKnown RBP eCLIP27.38■■□□□ 1.97
BRF1-213ENST00000548421 ATP4BP51164 291 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 PDX1P52945 283 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 PLA2G16P53816 162 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 STX1BP61266 288 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 SQLEQ14534 574 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 GPR19Q15760 415 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 ABHD17CQ6PCB6 329 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 UBE3DQ7Z6J8 389 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 B3GNT8Q7Z7M8 397 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 CPSF7Q8N684 471 aaKnown RBP27.38■■□□□ 1.97
BRF1-213ENST00000548421 TMEM74Q96NL1 305 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 C17orf62Q9BQA9 187 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 BRINP2Q9C0B6 783 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 STARD5Q9NSY2 213 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 IRAK4Q9NWZ3 460 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 DLGAP4Q9Y2H0 992 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 TMEM150CB9EJG8 249 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 PCDH7O60245 1069 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 CTSBP07858 339 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 PRPS2P11908 318 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 BCKDHAP12694 445 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 BSGP35613 385 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 TSFMP43897 325 aaKnown RBP27.38■■□□□ 1.97
BRF1-213ENST00000548421 RAE1P78406 368 aaKnown RBP27.38■■□□□ 1.97
BRF1-213ENST00000548421 UBAP2LQ14157 1087 aaKnown RBP27.38■■□□□ 1.97
BRF1-213ENST00000548421 RPS6KA2Q15349 733 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 PRTGQ2VWP7 1150 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 TMEM214Q6NUQ4 689 aaKnown RBP27.38■■□□□ 1.97
BRF1-213ENST00000548421 ABHD13Q7L211 337 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 NUDT13Q86X67 352 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 UTP15Q8TED0 518 aaKnown RBP27.38■■□□□ 1.97
BRF1-213ENST00000548421 QRFPRQ96P65 431 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 TBCDQ9BTW9 1192 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 EBPLQ9BY08 206 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 LHX9Q9NQ69 397 aa27.38■■□□□ 1.97
BRF1-213ENST00000548421 ADAM29Q9UKF5 820 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms