RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PHTF1Q9UMS5 762 aa12.16□□□□□ -0.46
DDX55-206ENST00000539934 MAGED2Q9UNF1 606 aaPredicted RBP12.16□□□□□ -0.46
DDX55-206ENST00000539934 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
DDX55-206ENST00000539934 ACTL7BQ9Y614 415 aa12.16□□□□□ -0.46
DDX55-206ENST00000539934 TCRBV9S1A1TA0A576 114 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 TBC1D4O60343 1298 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 TRIM3O75382 744 aaPredicted RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 PIAS1O75925 651 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 IL1BP01584 269 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 HAPLN1P10915 354 aaPredicted RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 CD36P16671 472 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 NDUFB7P17568 137 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 KPNA2P52292 529 aaKnown RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 IL9RQ01113 521 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 EFEMP1Q12805 493 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 TDGQ13569 410 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 STARD3Q14849 445 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 IRF4Q15306 451 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 CYB5R2Q6BCY4 276 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 MSANTD2Q6P1R3 559 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 ZNF534Q76KX8 674 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 RRM2BQ7LG56 351 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 BTLAQ7Z6A9 289 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 SOX7Q9BT81 388 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 PDE7BQ9NP56 450 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 IMPAD1Q9NX62 359 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 MIOXQ9UGB7 285 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 RALYQ9UKM9 306 aaKnown RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 ZFP37Q9Y6Q3 630 aaPredicted RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 LAMA1P25391 3075 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 C2orf16Q68DN1 1984 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 MYOCOSA0A1B0GUC4 107 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 ANKDD1BA6NHY2 528 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 FGF10O15520 208 aaPredicted RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 CRCPO75575 148 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 PCDH8O95206 1070 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 ZNF182P17025 639 aaPredicted RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 PTPN3P26045 913 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 STAT5AP42229 794 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 GRIA1P42261 906 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 ZNF45Q02386 682 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 C17orf67Q0P5P2 114 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 TAF10Q12962 218 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 SEC23BQ15437 767 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 HSD17B12Q53GQ0 312 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 PARP8Q8N3A8 854 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 ZNF511Q8NB15 262 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 TMEM169Q96HH4 297 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 LRFN5Q96NI6 719 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 TEX12Q9BXU0 123 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 EIF2B3Q9NR50 452 aaKnown RBP12.15□□□□□ -0.46
DDX55-206ENST00000539934 SH3BP4Q9P0V3 963 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 ASH2LQ9UBL3 628 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 FKBP7Q9Y680 259 aa12.15□□□□□ -0.46
DDX55-206ENST00000539934 USP24Q9UPU5 2620 aa12.15□□□□□ -0.47
DDX55-206ENST00000539934 AHRRA9YTQ3 701 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 DFFAO00273 331 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 EDF1O60869 148 aaKnown RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 H2AFYO75367 372 aaKnown RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 VNN2O95498 520 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 H2AFB2P0C5Z0 115 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 DDX6P26196 483 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX55-206ENST00000539934 SLC7A1P30825 629 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 RYKP34925 604 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 MAGEA3P43357 314 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ALDH3A2P51648 485 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 PRKAA2P54646 552 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 USP10Q14694 798 aaKnown RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 GPR33Q49SQ1 333 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 PAN3Q58A45 887 aaKnown RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 FDX2Q6P4F2 183 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ADGRD1Q6QNK2 874 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 SLC36A4Q6YBV0 504 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 USP53Q70EK8 1073 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 TRAM1L1Q8N609 369 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 OR4M1Q8NGD0 313 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ST7LQ8TDW4 575 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 SLC5A11Q8WWX8 675 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 RHBDF1Q96CC6 855 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 REPS1Q96D71 796 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 TMEM41AQ96HV5 264 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 RILPQ96NA2 401 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 MED18Q9BUE0 208 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 TRABDQ9H4I3 376 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 GAREM1Q9H706 876 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 MYOZ1Q9NP98 299 aaPredicted RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 FBXO8Q9NRD0 319 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ZSCAN32Q9NX65 697 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 NKIRAS1Q9NYS0 192 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 HS3ST4Q9Y661 456 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 SPEGQ15772 3267 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 A0A1B0GVM2 712 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 WDR27A2RRH5 827 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms