RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SLC19A1P41440 591 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 CCR8P51685 355 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 SRSF11Q05519 484 aaKnown RBP13.51□□□□□ -0.25
ACTN1-205ENST00000538545 LAPTM4AQ15012 233 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 KIAA1614Q5VZ46 1190 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 IYDQ6PHW0 289 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 METTL4Q8N3J2 472 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 OR8J2Q8NGG1 315 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 OR4A15Q8NGL6 344 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 MAGEB10Q96LZ2 347 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-205ENST00000538545 WDR92Q96MX6 357 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 AIF1LQ9BQI0 150 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 DPH7Q9BTV6 452 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 EHD1Q9H4M9 534 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 TPT1P8Q9HAU6 139 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 LTB4R2Q9NPC1 389 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 PRDM6Q9NQX0 595 aa13.51□□□□□ -0.25
ACTN1-205ENST00000538545 TEX10Q9NXF1 929 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-205ENST00000538545 EI24O14681 340 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 TMPRSS11DO60235 418 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 CHRNB1P11230 501 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 PKLRP30613 574 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 BCL6P41182 706 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 CCT8P50990 548 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
ACTN1-205ENST00000538545 FOXD4Q12950 439 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-205ENST00000538545 UBXN2BQ14CS0 331 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 FXNQ16595 210 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 CCNYL2Q5T2Q4 361 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 KRT78Q8N1N4 520 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 SLC6A16Q9GZN6 736 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 LMAN1LQ9HAT1 526 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 GPATCH2Q9NW75 528 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 RNF103-CHMP3A0A140T963 221 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 DLGAP1O14490 977 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 ZNF682O95780 498 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 FURINP09958 794 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 ZNF23P17027 643 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 POLE2P56282 527 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 SMAD4Q13485 552 aaKnown RBP13.5□□□□□ -0.25
ACTN1-205ENST00000538545 CYP27C1Q4G0S4 372 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 AASDHQ4L235 1098 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-205ENST00000538545 CMPK2Q5EBM0 449 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 DEPDC1Q5TB30 811 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 KHDRBS2Q5VWX1 349 aaKnown RBP13.5□□□□□ -0.25
ACTN1-205ENST00000538545 UBE3DQ7Z6J8 389 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 VTCN1Q7Z7D3 282 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 PROSER1Q86XN7 944 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 OR10G6Q8NH81 332 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 DNASE1L2Q92874 299 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 MS4A8Q9BY19 250 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 SLAMF7Q9NQ25 335 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 TRPV5Q9NQA5 729 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 THEGQ9P2T0 379 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 ASXL3Q9C0F0 2248 aa13.5□□□□□ -0.25
ACTN1-205ENST00000538545 LRRC72A6NJI9 287 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ACOX3O15254 700 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 HNRNPRO43390 633 aaKnown RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 EPN2O95208 641 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ALPPL2P10696 532 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 TEAD1P28347 426 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 CCR3P51677 355 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 SRP54P61011 504 aaKnown RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 RPS26P62854 115 aaKnown RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 LRRC32Q14392 662 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ADRM1Q16186 407 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 GALNT18Q6P9A2 607 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 LSRQ86X29 649 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 CALHM3Q86XJ0 350 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 NRROSQ86YC3 692 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 PTOV1Q86YD1 416 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 NAGSQ8N159 534 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ABHD11Q8NFV4 315 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 REEP4Q9H6H4 257 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 NTN4Q9HB63 628 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 MRPS30Q9NP92 439 aaKnown RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 AASDHPPTQ9NRN7 309 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 SCML1Q9UN30 329 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 A0A1W2PS29 197 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 GPR89AB7ZAQ6 455 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 KCNK5O95279 499 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 CAPNS1P04632 268 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 GPIP06744 558 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 GPR89BP0CG08 455 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 RAB8AP61006 207 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ARHGAP19Q14CB8 494 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ZNF793Q6ZN11 406 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 MAGEE2Q8TD90 523 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 LCN9Q8WX39 176 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 PPCDCQ96CD2 204 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 TEFMQ96QE5 360 aaKnown RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 WASH6PQ9NQA3 447 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 TAAR2Q9P1P5 351 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 SNX8Q9Y5X2 465 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 NME6O75414 186 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 GMNNO75496 209 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 OPN1SWP03999 348 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ATXN8OSP0DMR3 200 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 BMP2P12643 396 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ETFAP13804 333 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms