RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	NEK2	P51955	445 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	LIMK2	P53671	638 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC16A1	P53985	500 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CDKN2D	P55273	166 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	MAZ	P56270	477 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	NCALD	P61601	193 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	IRX1	P78414	480 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	NAA25	Q14CX7	972 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	MST1L	Q2TV78	715 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	FAM214A	Q32MH5	1076 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	C14orf28	Q4W4Y0	310 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TAF1B	Q53T94	588 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF789	Q5FWF6	425 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PLEKHS1	Q5SXH7	462 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	RBM20	Q5T481	1227 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	HECTD2	Q5U5R9	776 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	AGAP9	Q5VTM2	703 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF549	Q6P9A3	640 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	KLHL35	Q6PF15	583 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	IYD	Q6PHW0	289 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	WASH2P	Q6VEQ5	465 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	NAPRT	Q6XQN6	538 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	RAPH1	Q70E73	1250 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SPATA21	Q7Z572	469 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	C11orf96	Q7Z7L8	435 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC9B2	Q86UD5	537 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PIM3	Q86V86	326 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	NRROS	Q86YC3	692 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC35F3	Q8IY50	421 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC22A15	Q8IZD6	547 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	MYO1H	Q8N1T3	1032 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PQLC1	Q8N2U9	271 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SFRP1	Q8N474	314 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	RAB42	Q8N4Z0	105 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SIDT2	Q8NBJ9	832 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	OR6C4	Q8NGE1	309 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CFAP61	Q8NHU2	1237 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC37A2	Q8TED4	501 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC44A1	Q8WWI5	657 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ST8SIA2	Q92186	375 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TFG	Q92734	400 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	INPP5D	Q92835	1189 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SH3KBP1	Q96B97	665 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	MTBP	Q96DY7	904 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CNDP2	Q96KP4	475 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	APOLD1	Q96LR9	279 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	RMDN2	Q96LZ7	410 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	C12orf66	Q96MD2	445 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TSNARE1	Q96NA8	513 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	GPR21	Q99679	349 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	GPR22	Q99680	433 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ELAC2	Q9BQ52	826 aa	Known RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	WWP1	Q9H0M0	922 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ABCG4	Q9H172	646 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SYNDIG1	Q9H7V2	258 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SYTL2	Q9HCH5	934 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	WASH6P	Q9NQA3	447 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	SMYD2	Q9NRG4	433 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TXLNG	Q9NUQ3	528 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ABCF3	Q9NUQ8	709 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	POT1	Q9NUX5	634 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	KLHL42	Q9P2K6	505 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	CPNE7	Q9UBL6	633 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	FETUB	Q9UGM5	382 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TRPS1	Q9UHF7	1281 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TUBD1	Q9UJT1	453 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ZNF180	Q9UJW8	692 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	TLK1	Q9UKI8	766 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PADI4	Q9UM07	663 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ASF1A	Q9Y294	204 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	BTBD3	Q9Y2F9	522 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	ARL2BP	Q9Y2Y0	163 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PLEKHM1	Q9Y4G2	1056 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PRSS21	Q9Y6M0	314 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	COLEC10	Q9Y6Z7	277 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	OTOGL	Q3ZCN5	2332 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	PIKFYVE	Q9Y2I7	2098 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	GPR179	Q6PRD1	2367 aa		4.17	□□□□□ -1.74
SNHG1-208	ENST00000538266	COL5A1	P20908	1838 aa	Predicted RBP	4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266		A0A087X1B8	175 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC5A10	A0PJK1	596 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266		A6NCN8	305 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	OR52A4P	A6NMU1	304 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	KRTAP9-7	A8MTY7	169 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	CAPN14	A8MX76	684 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	TRIM49D1	C9J1S8	452 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	EIF3F	O00303	357 aa	Predicted RBP	4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	SLC30A4	O14863	429 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	PHGDH	O43175	533 aa	Known RBP	4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	DUX1	O43812	170 aa		4.16	□□□□□ -1.74
SNHG1-208	ENST00000538266	SNX3	O60493	162 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms