RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ACY1Q03154 408 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 UBAP2LQ14157 1087 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 TCEAL1Q15170 157 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 RASA2Q15283 850 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ADGRD1Q6QNK2 874 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 SPESP1Q6UW49 350 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 MICU2Q8IYU8 434 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 GHDCQ8N2G8 530 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CCDC126Q96EE4 140 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 TPD52L3Q96J77 140 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 BTBD9Q96Q07 612 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CCNL2Q96S94 520 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 TEX101Q9BY14 249 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CPNE5Q9HCH3 593 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 PLA2G3Q9NZ20 509 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CTSFQ9UBX1 484 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ZFP69BQ9UJL9 534 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 OR5K3A6NET4 321 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 MYO1GB0I1T2 1018 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 SCO2O43819 266 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 PEX1O43933 1283 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 LCMT2O60294 686 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 KCNK5O95279 499 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 MT-ND1P03886 318 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 TFPIP10646 304 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ATP6V1C1P21283 382 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 RPL14P50914 215 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 DIO3P55073 304 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 TPD52P55327 224 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 NFYCQ13952 458 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 MPP2Q14168 576 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CCDC153Q494R4 210 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 IL20RBQ6UXL0 311 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 BNC2Q6ZN30 1099 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 RRM2BQ7LG56 351 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 OLIG3Q7RTU3 272 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 SLCO6A1Q86UG4 719 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CENPLQ8N0S6 344 aaPredicted RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 LIX1Q8N485 282 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CCDC197Q8NCU1 140 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 OR5K2Q8NHB8 316 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 KCNE4Q8WWG9 221 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 LRRC37BQ96QE4 947 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 EBF4Q9BQW3 602 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 CUTCQ9NTM9 273 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ZCCHC3Q9NUD5 404 aaKnown RBP6.92□□□□□ -1.3
MSH6-209ENST00000538136 POT1Q9NUX5 634 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ZDHHC2Q9UIJ5 367 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 ACSL6Q9UKU0 697 aa6.92□□□□□ -1.3
MSH6-209ENST00000538136 A0A1W2PQM1 296 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 GTPBP1O00178 669 aaKnown RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 MEN1O00255 615 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 NKX2-8O15522 239 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 C1GALT1C1LP0DN25 315 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 NTSP30990 170 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 TRIM23P36406 574 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 NCBP2P52298 156 aaKnown RBP eCLIP6.91□□□□□ -1.3
MSH6-209ENST00000538136 NFATC3Q12968 1075 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LCP2Q13094 533 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LASP1Q14847 261 aaKnown RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 LRRC36Q1X8D7 754 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.91□□□□□ -1.3
MSH6-209ENST00000538136 PWWP2BQ6NUJ5 590 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CYP2R1Q6VVX0 501 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ZNF551Q7Z340 670 aaPredicted RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 MMP21Q8N119 569 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 C19orf47Q8N9M1 422 aaKnown RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 ZBTB44Q8NCP5 570 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 OR2L3Q8NG85 312 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SAP25Q8TEE9 199 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LZICQ8WZA0 190 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 EXTL1Q92935 676 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 KIAA1191Q96A73 305 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 RTP4Q96DX8 246 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SLC39A3Q9BRY0 314 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 TIMM29Q9BSF4 260 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 HAUS8Q9BT25 410 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CD244Q9BZW8 370 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 TRIM4Q9C037 500 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 KLHL31Q9H511 634 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 LDAHQ9H6V9 325 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 PRTFDC1Q9NRG1 225 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 EURLQ9NYK6 297 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 UTS2RQ9UKP6 389 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ICKQ9UPZ9 632 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ALPK3Q96L96 1907 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 A0A0J9YY10 115 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 BHMG1C9JSJ3 638 aaPredicted RBP6.91□□□□□ -1.3
MSH6-209ENST00000538136 ZNHIT1O43257 154 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SGTAO43765 313 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 KERAO60938 352 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 RFPL1O75677 317 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CBSLP0DN79 551 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 TCF3P15923 654 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 SLC5A2P31639 672 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 CBSP35520 551 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 AP1S2P56377 157 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 ARG2P78540 354 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 GPR68Q15743 365 aa6.91□□□□□ -1.3
MSH6-209ENST00000538136 VPS26BQ4G0F5 336 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms