RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ANKDD1B	A6NHY2	528 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	C2orf81	A6NN90	581 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	PLK4	O00444	970 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	WNT9B	O14905	357 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	GPRIN2	O60269	458 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	KIF5C	O60282	957 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	IDH1	O75874	414 aa	Known RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	F7	P08709	466 aa	Predicted RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	EPCAM	P16422	314 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	PIK3R1	P27986	724 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	PSMA5	P28066	241 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	PKLR	P30613	574 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	GDI1	P31150	447 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	AKT2	P31751	481 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	CDX1	P47902	265 aa	Predicted RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	CNN1	P51911	297 aa	Known RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	GSDMD	P57764	484 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ILF3	Q12906	894 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	MYBPH	Q13203	477 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	CUL2	Q13617	745 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ZRSR1	Q15695	479 aa	Known RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	SLC15A2	Q16348	729 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	DECR1	Q16698	335 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	LACTB2	Q53H82	288 aa	Predicted RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	XKR9	Q5GH70	373 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	SPATA46	Q5T0L3	261 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ATG9A	Q7Z3C6	839 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ASPG	Q86U10	573 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ZC3HC1	Q86WB0	502 aa	Known RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	CDH26	Q8IXH8	852 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	APCDD1	Q8J025	514 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	GCSAM	Q8N6F7	178 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	OR2T34	Q8NGX1	318 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	SELENOM	Q8WWX9	145 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	SYN2	Q92777	582 aa	Predicted RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	TAAR8	Q969N4	342 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	RHBDF1	Q96CC6	855 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ORAI1	Q96D31	301 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	SCMH1	Q96GD3	660 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	C16orf58	Q96GQ5	468 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	FAM81B	Q96LP2	452 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	RASL10B	Q96S79	203 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	PUS3	Q9BZE2	481 aa	Known RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ATG10	Q9H0Y0	220 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	NAPB	Q9H115	298 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	UBQLN3	Q9H347	655 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	GORASP2	Q9H8Y8	452 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	HHATL	Q9HCP6	504 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979		Q9N2K0	584 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	SMPD3	Q9NY59	655 aa	Predicted RBP	4.35	□□□□□ -1.71
ATM-223	ENST00000533979	SNX6	Q9UNH7	406 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	PLA2G4C	Q9UP65	541 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	NSD2	O96028	1365 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	TMEM2	Q9UHN6	1383 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	NAIP	Q13075	1403 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979	GCC2	Q8IWJ2	1684 aa		4.35	□□□□□ -1.71
ATM-223	ENST00000533979		A0A1W2PPK0	400 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	ERICH4	A6NGS2	130 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	FAM90A26	D6RGX4	464 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	BOLA2-SMG1P6	H3BVE0	249 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979		J3KR12	359 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	CASQ2	O14958	399 aa	Predicted RBP	4.34	□□□□□ -1.71
ATM-223	ENST00000533979	SPINT2	O43291	252 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	ADCY5	O95622	1261 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	CH25H	O95992	272 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	IGHV2-70	P01814	119 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	CCDC159	P0C7I6	412 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	GZMA	P12544	262 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	MYL6B	P14649	208 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	CYP2A7	P20853	494 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	UGT1A1	P22309	533 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	CCNC	P24863	283 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	PIGA	P37287	484 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	PTGER3	P43115	390 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	SLC6A12	P48065	614 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	DLX5	P56178	289 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	COG7	P83436	770 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	IDI1	Q13907	227 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	PTGIS	Q16647	500 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	ZNF718	Q3SXZ3	478 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	LRRC23	Q53EV4	343 aa	Predicted RBP	4.34	□□□□□ -1.71
ATM-223	ENST00000533979	PRAMEF7	Q5VXH5	474 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	C16orf87	Q6PH81	154 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	RHBDF2	Q6PJF5	856 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	CES3	Q6UWW8	571 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	USP43	Q70EL4	1123 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	OTUD6A	Q7L8S5	288 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	TMPRSS11B	Q86T26	416 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	ANKRD46	Q86W74	232 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	MEX3D	Q86XN8	651 aa	Known RBP	4.34	□□□□□ -1.71
ATM-223	ENST00000533979	TMEM126B	Q8IUX1	230 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	C1orf87	Q8N0U7	546 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.34	□□□□□ -1.71
ATM-223	ENST00000533979	RNF148	Q8N7C7	305 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	SLC20A1	Q8WUM9	679 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	ESAM	Q96AP7	390 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	LINGO1	Q96FE5	620 aa		4.34	□□□□□ -1.71
ATM-223	ENST00000533979	ZNF582	Q96NG8	517 aa	Predicted RBP	4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms