RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 B3GALT4O96024 378 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 S100BP04271 92 aaPredicted RBP28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 SERPINA6P08185 405 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 TFEBP19484 476 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 HNF4AP41235 474 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 KCNC1P48547 511 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 MFAP5Q13361 173 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 SLBPQ14493 270 aaKnown RBP eCLIP28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 CRB2Q5IJ48 1285 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 LINC00696Q6ZRV3 163 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 RIPOR1Q6ZS17 1223 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 LANCL3Q6ZV70 420 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 CPEB2Q7Z5Q1 589 aaKnown RBP28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 ISCA2Q86U28 154 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 IFT81Q8WYA0 676 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 PSMF1Q92530 271 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 EXT2Q93063 718 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 ESAMQ96AP7 390 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 LMF1Q96S06 567 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 IGSF5Q9NSI5 407 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 CSAG2Q9Y5P2 127 aa28.58■■■□□ 2.17
SSSCA1-207ENST00000533115 CLGNO14967 610 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 LTA4HP09960 611 aaKnown RBP28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 ICAM2P13598 275 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 MROH9Q5TGP6 573 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 TMIGD1Q6UXZ0 262 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 CUZD1Q86UP6 607 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 KRT78Q8N1N4 520 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 TTLQ8NG68 377 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 DNAJB14Q8TBM8 379 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 BRIX1Q8TDN6 353 aaKnown RBP28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 IMMP1LQ96LU5 166 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 RBCK1Q9BYM8 510 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 KLHL31Q9H511 634 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 ACSS3Q9H6R3 686 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 LANCL2Q9NS86 450 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 MAP10Q9P2G4 905 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 COPG2Q9UBF2 871 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 ACOT9Q9Y305 439 aa28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 RP1L1Q8IWN7 2480 aaPredicted RBP28.57■■■□□ 2.16
SSSCA1-207ENST00000533115 CHST10O43529 356 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 DNAJB6O75190 326 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 CELA2AP08217 269 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 SMIM10L1P0DMW3 83 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 AGTR2P50052 363 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 RAB8AP61006 207 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 AP2B1P63010 937 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 OLR1P78380 273 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 BMPR2Q13873 1038 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 UAP1Q16222 522 aaPredicted RBP28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 UBAP2Q5T6F2 1119 aaKnown RBP28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 SETXQ7Z333 2677 aaKnown RBP28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 CCDC91Q7Z6B0 441 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 ANKRD37Q7Z713 158 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 SNX31Q8N9S9 440 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 KIF18AQ8NI77 898 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 SNRNP40Q96DI7 357 aaKnown RBP28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 SMIM10Q96HG1 83 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 PITHD1Q9GZP4 211 aaPredicted RBP28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 EHD1Q9H4M9 534 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 NT5DC2Q9H857 520 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 CLK4Q9HAZ1 481 aaKnown RBP28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 NUDT4Q9NZJ9 180 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 PTGFRNQ9P2B2 879 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 SHANK1Q9Y566 2161 aa28.56■■■□□ 2.16
SSSCA1-207ENST00000533115 IGHV3-20A0A0C4DH32 117 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 HMX2A2RU54 273 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 KERAO60938 352 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 CDC123O75794 336 aaPredicted RBP28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 WFS1O76024 890 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 FHP07954 510 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 SOX11P35716 441 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 RHAGQ02094 409 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 PDK4Q16654 411 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 TOR1AIP1Q5JTV8 583 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 CISD2Q8N5K1 135 aaKnown RBP28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 SIRT6Q8N6T7 355 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 PLPP5Q8NEB5 264 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 TBC1D20Q96BZ9 403 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 NXNL1Q96CM4 212 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 ATOH8Q96SQ7 321 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 FMO2Q99518 471 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 FUT8Q9BYC5 575 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 CDC42EP4Q9H3Q1 356 aaKnown RBP28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 PCDHGA10Q9Y5H3 936 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 CNTRLQ7Z7A1 2325 aa28.55■■■□□ 2.16
SSSCA1-207ENST00000533115 A0A087X1B8 175 aa28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 CCNT2O60583 730 aaKnown RBP28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 SEC24DO94855 1032 aaPredicted RBP28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 GSTM2P28161 218 aa28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 STXBP1P61764 594 aaKnown RBP28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 C19orf60Q96EN9 201 aa28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 SEC16BQ96JE7 1060 aa28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 CD244Q9BZW8 370 aa28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 AICDAQ9GZX7 198 aa28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 SNX15Q9NRS6 342 aa28.54■■■□□ 2.16
SSSCA1-207ENST00000533115 SUPT3HB4E1H0 165 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 PRAMEF4O60810 478 aa28.53■■■□□ 2.16
SSSCA1-207ENST00000533115 SUPT3HO75486 399 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms