RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 USP10Q14694 798 aaKnown RBP16.75■□□□□ 0.27
PCF11-206ENST00000533018 OR1C1Q15619 314 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 SPINK14Q6IE38 97 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 NIPAL1Q6NVV3 410 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 SYDE1Q6ZW31 735 aaPredicted RBP16.75■□□□□ 0.27
PCF11-206ENST00000533018 THOC6Q86W42 341 aaKnown RBP16.75■□□□□ 0.27
PCF11-206ENST00000533018 AFAP1L2Q8N4X5 818 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 MARVELD3Q96A59 401 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 PTCHD1Q96NR3 888 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 SIGLEC12Q96PQ1 595 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 EGFL8Q99944 293 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 SARGQ9BW04 601 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 TRIM31Q9BZY9 425 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 RHBGQ9H310 441 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 PLAC1Q9HBJ0 212 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 LANCL2Q9NS86 450 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 IKZF3Q9UKT9 509 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 CSMD1Q96PZ7 3565 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 URADA6NGE7 173 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 GABRR3A8MPY1 467 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 PSMD12O00232 456 aaPredicted RBP16.74■□□□□ 0.27
PCF11-206ENST00000533018 CDC7O00311 574 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 NDC80O14777 642 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 HNRNPRO43390 633 aaKnown RBP16.74■□□□□ 0.27
PCF11-206ENST00000533018 CD46P15529 392 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 AHRP35869 848 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 SCTRP47872 440 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 SLC26A5P58743 744 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 NAA30Q147X3 362 aaPredicted RBP16.74■□□□□ 0.27
PCF11-206ENST00000533018 SBSNQ6UWP8 590 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 STRA8Q7Z7C7 330 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 TMPRSS11BQ86T26 416 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 SRRM1Q8IYB3 904 aaKnown RBP16.74■□□□□ 0.27
PCF11-206ENST00000533018 NKAPQ8N5F7 415 aaKnown RBP16.74■□□□□ 0.27
PCF11-206ENST00000533018 HORMAD2Q8N7B1 307 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 TRPV3Q8NET8 790 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 NT5CQ8TCD5 201 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 LRRC39Q96DD0 335 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 RUNDC3BQ96NL0 473 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 AIF1LQ9BQI0 150 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 HES7Q9BYE0 225 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 SPNS1Q9H2V7 528 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 CDCP1Q9H5V8 836 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 SLC22A14Q9Y267 594 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 TEX264Q9Y6I9 313 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 KCNE2Q9Y6J6 123 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 ABCA12Q86UK0 2595 aa16.74■□□□□ 0.27
PCF11-206ENST00000533018 NPEPPSL1A6NEC2 478 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 ENO4A6NNW6 628 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 MAN1A2O60476 641 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 PRMT3O60678 531 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 MLYCDO95822 493 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 ZNF37AP17032 561 aaPredicted RBP16.73■□□□□ 0.27
PCF11-206ENST00000533018 ALDH6A1Q02252 535 aaKnown RBP16.73■□□□□ 0.27
PCF11-206ENST00000533018 MGAT5Q09328 741 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 PDIA2Q13087 525 aaKnown RBP16.73■□□□□ 0.27
PCF11-206ENST00000533018 ZNF460Q14592 562 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.73■□□□□ 0.273e-16■□□□□ 8.4
PCF11-206ENST00000533018 STEAP4Q687X5 459 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 FRA10AC1Q70Z53 315 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 MRGPRGQ86SM5 289 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 TMEM178AQ8NBL3 297 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 MDS2Q8NDY4 140 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 UTP15Q8TED0 518 aaKnown RBP16.73■□□□□ 0.27
PCF11-206ENST00000533018 CCDC120Q96HB5 630 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 PDLIM5Q96HC4 596 aaKnown RBP16.73■□□□□ 0.27
PCF11-206ENST00000533018 NPAS2Q99743 824 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 WDR83Q9BRX9 315 aaKnown RBP16.73■□□□□ 0.27
PCF11-206ENST00000533018 TSPAN10Q9H1Z9 355 aaPredicted RBP16.73■□□□□ 0.27
PCF11-206ENST00000533018 PELI2Q9HAT8 420 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 ENTPD4Q9Y227 616 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 PSAT1Q9Y617 370 aa16.73■□□□□ 0.27
PCF11-206ENST00000533018 FAM95CA0A1B0GW59 222 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 SLC19A2O60779 497 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 ESRRAP11474 423 aaPredicted RBP16.72■□□□□ 0.27
PCF11-206ENST00000533018 GNG11P61952 73 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 BTG2P78543 158 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 REEP5Q00765 189 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 MAPKAPK3Q16644 382 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 TOR1AIP1Q5JTV8 583 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 MTFR2Q6P444 385 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 NXPE4Q6UWF7 544 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 ZC3HC1Q86WB0 502 aaKnown RBP16.72■□□□□ 0.27
PCF11-206ENST00000533018 RPS19BP1Q86WX3 136 aaKnown RBP16.72■□□□□ 0.27
PCF11-206ENST00000533018 KIF2BQ8N4N8 673 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 ANKRD53Q8N9V6 530 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 FAM98AQ8NCA5 519 aaKnown RBP16.72■□□□□ 0.27
PCF11-206ENST00000533018 FBXO36Q8NEA4 188 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 MAGED4Q96JG8 741 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 KLHL31Q9H511 634 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 LRFN1Q9P244 771 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 CTNNAL1Q9UBT7 734 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 PCDHGB6Q9Y5F9 930 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 GTF3C1Q12789 2109 aa16.72■□□□□ 0.27
PCF11-206ENST00000533018 A8MUA0 341 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 NPIPA5E9PKD4 350 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 WISP2O76076 250 aa16.71■□□□□ 0.27
PCF11-206ENST00000533018 SEC31AO94979 1220 aaKnown RBP16.71■□□□□ 0.27
PCF11-206ENST00000533018 SP1P08047 785 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms