RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ETFAP13804 333 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ACVR2AP27037 513 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 NFE2L1Q14494 772 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 SPCS2Q15005 226 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 FNDC3BQ53EP0 1204 aaKnown RBP16.87■□□□□ 0.29
USH1C-205ENST00000527020 CRTC3Q6UUV7 619 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 NXPE4Q6UWF7 544 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 FAM83HQ6ZRV2 1179 aaPredicted RBP16.87■□□□□ 0.29
USH1C-205ENST00000527020 FAM124AQ86V42 546 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 C11orf65Q8NCR3 313 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ZNF740Q8NDX6 193 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 C16orf78Q8WTQ4 265 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 SLC5A11Q8WWX8 675 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 FAM129BQ96TA1 746 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 RHNO1Q9BSD3 238 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ZDHHC5Q9C0B5 715 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 KRT84Q9NSB2 600 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 GALNT8Q9NY28 637 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ENPP5Q9UJA9 477 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 PCDHGA10Q9Y5H3 936 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 C2orf16Q68DN1 1984 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ZNF197O14709 1029 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 TLL1O43897 1013 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 POP7O75817 140 aaKnown RBP16.87■□□□□ 0.29
USH1C-205ENST00000527020 C9P02748 559 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ADRB3P13945 408 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 DPTQ07507 201 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ELP6Q0PNE2 266 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 MAD2L1BPQ15013 274 aaPredicted RBP16.87■□□□□ 0.29
USH1C-205ENST00000527020 FAM71E1Q6IPT2 247 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 TRMT11Q7Z4G4 463 aaKnown RBP16.87■□□□□ 0.29
USH1C-205ENST00000527020 C11orf96Q7Z7L8 435 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ZBTB46Q86UZ6 589 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 EPYCQ99645 322 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 PITX2Q99697 317 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 DOHHQ9BU89 302 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 CCDC90BQ9GZT6 254 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ITM2CQ9NQX7 267 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 WARS2Q9UGM6 360 aaKnown RBP16.87■□□□□ 0.29
USH1C-205ENST00000527020 PADI2Q9Y2J8 665 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 AP1M2Q9Y6Q5 423 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 CDH23Q9H251 3354 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 ZNF99A8MXY4 864 aaPredicted RBP16.86■□□□□ 0.29
USH1C-205ENST00000527020 NDUFS2O75306 463 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 BCAS1O75363 584 aaPredicted RBP16.86■□□□□ 0.29
USH1C-205ENST00000527020 DNAJB5O75953 348 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 BCL10O95999 233 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 NR4A1P22736 598 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 CXCR4P61073 352 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 LRRC74AQ0VAA2 488 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 CTF1Q16619 201 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 SMN1Q16637 294 aaKnown RBP16.86■□□□□ 0.29
USH1C-205ENST00000527020 ZNF829Q3KNS6 432 aaPredicted RBP16.86■□□□□ 0.29
USH1C-205ENST00000527020 PAGE2BQ5JRK9 111 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 C10orf62Q5T681 223 aaPredicted RBP16.86■□□□□ 0.29
USH1C-205ENST00000527020 VN1R5Q7Z5H4 357 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 ANKRD13BQ86YJ7 626 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 METTL4Q8N3J2 472 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 ATG16L2Q8NAA4 619 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 OR8D1Q8WZ84 308 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 UBE2FQ969M7 185 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 SLC35A5Q9BS91 424 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 MYNNQ9NPC7 610 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 TMEM184CQ9NVA4 438 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 ADPRHL2Q9NX46 363 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 KIF17Q9P2E2 1029 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 COL4A3Q01955 1670 aa16.86■□□□□ 0.29
USH1C-205ENST00000527020 EDDM13A0A1B0GTR0 161 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 C17orf113A0A1B0GUU1 675 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 MAGEB3O15480 346 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 CRATP43155 626 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 MASP1P48740 699 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 SELENOWP63302 87 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 TEAD4Q15561 434 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 TMEM240Q5SV17 173 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 KIAA1614Q5VZ46 1190 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 TSPYL5Q86VY4 417 aaPredicted RBP16.85■□□□□ 0.29
USH1C-205ENST00000527020 DRAXINQ8NBI3 349 aaPredicted RBP16.85■□□□□ 0.29
USH1C-205ENST00000527020 OR2L2Q8NH16 312 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 IL17FQ96PD4 163 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 DPEP2Q9H4A9 486 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 NDUFAF4Q9P032 175 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 ACSL6Q9UKU0 697 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 ANTXRLA6NF34 631 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 PRAMEF25A6NGN4 478 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 LZTS3O60299 673 aaPredicted RBP16.85■□□□□ 0.29
USH1C-205ENST00000527020 MAN1A2O60476 641 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 GPR37L1O60883 481 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 OPN1SWP03999 348 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 TNFRSF1BP20333 461 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 RRM2P31350 389 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 MAP2K4P45985 399 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 BMXP51813 675 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 TAS2R50P59544 299 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 C2orf80Q0P641 193 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 NPRL3Q12980 569 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 NPTX1Q15818 432 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 MOGQ16653 247 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 PLA2G15Q8NCC3 412 aa16.85■□□□□ 0.29
USH1C-205ENST00000527020 OR52N2Q8NGI0 321 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms