RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 SPAG7O75391 227 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 KLF7O75840 302 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 TBX6O95947 436 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 SMIM10L1P0DMW3 83 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 CREB1P16220 341 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 ALOX12P18054 663 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 CDH13P55290 713 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 PHEXP78562 749 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 ASPHQ12797 758 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 LCP2Q13094 533 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 PCLAFQ15004 111 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 RBBP7Q16576 425 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MLIPQ5VWP3 458 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MILR1Q7Z6M3 343 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 DTWD1Q8N5C7 304 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 METTL27Q8N6F8 245 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 AMER3Q8N944 861 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 OR4F6Q8NGB9 312 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 OR9A4Q8NGU2 314 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 OR2Y1Q8NGV0 311 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 ZCCHC10Q8TBK6 192 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 UTP15Q8TED0 518 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 COL26A1Q96A83 441 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MS4A6EQ96DS6 147 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MMABQ96EY8 250 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 SMIM10Q96HG1 83 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 FAM111AQ96PZ2 611 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MS4A8Q9BY19 250 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 GSTO2Q9H4Y5 243 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 VIPAS39Q9H9C1 493 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 CPNE5Q9HCH3 593 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MKKSQ9NPJ1 570 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 SLC17A7Q9P2U7 560 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 ZNF282Q9UDV7 671 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 TRPS1Q9UHF7 1281 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 PPT2Q9UMR5 302 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 RNF11Q9Y3C5 154 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MRPS18BQ9Y676 258 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MAU2Q9Y6X3 613 aa13.08□□□□□ -0.32
CTNNA1-226ENST00000521368 MAP1BP46821 2468 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ANKRD11Q6UB99 2663 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 LAMA5O15230 3695 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 A0A088AWK7 358 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TM9SF1O15321 606 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TRIM13O60858 407 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 KLHL18O94889 574 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ZNF888P0CJ79 500 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 PCNAP12004 261 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 IL1RNP18510 177 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ZNF10P21506 573 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 HNRNPH1P31943 449 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ARL1P40616 181 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ETV4P43268 484 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ARFIP1P53367 373 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 NAGLUP54802 743 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 PKNOX1P55347 436 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 SNRPNP63162 240 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 CXADRP78310 365 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 OCA2Q04671 838 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TGM3Q08188 693 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 SLC9A5Q14940 896 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 NKG7Q16617 165 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TMEM35AQ53FP2 167 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TOR1AIP1Q5JTV8 583 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 ADNP2Q6IQ32 1131 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 LETMD1Q6P1Q0 360 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 FRMD7Q6ZUT3 714 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 PRSS41Q7RTY9 318 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 HDXQ7Z353 690 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 PDSS2Q86YH6 399 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 C10orf107Q8IVU9 208 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 SRFBP1Q8NEF9 429 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 OR2L5Q8NG80 312 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 HUS1BQ8NHY5 278 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 WDR20Q8TBZ3 569 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TRPC4APQ8TEL6 797 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 CCT6BQ92526 530 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 NACC2Q96BF6 587 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 CMTM7Q96FZ5 175 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 CDK15Q96Q40 435 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 SPSB2Q99619 263 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TGIF2Q9GZN2 237 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 REXO4Q9GZR2 422 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 AICDAQ9GZX7 198 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 PRORYQ9H606 182 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 C14orf105Q9NVL8 296 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 CTSFQ9UBX1 484 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 NAALAD2Q9Y3Q0 740 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 USP24Q9UPU5 2620 aa13.07□□□□□ -0.32
CTNNA1-226ENST00000521368 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-226ENST00000521368 AGPSO00116 658 aa13.06□□□□□ -0.32
CTNNA1-226ENST00000521368 FOXE1O00358 373 aaPredicted RBP13.06□□□□□ -0.32
CTNNA1-226ENST00000521368 PPP6CO00743 305 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms