RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SPATA6LQ8N4H0 392 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 MFSD9Q8NBP5 474 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 NFAM1Q8NET5 270 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-202ENST00000517403 ABHD11Q8NFV4 315 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 OR4K1Q8NGD4 311 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 MAIP1Q8WWC4 291 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 HAS2Q92819 552 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 CCDC120Q96HB5 630 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 PBKQ96KB5 322 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 MAGEB10Q96LZ2 347 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-202ENST00000517403 FRMD6Q96NE9 622 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 LMF1Q96S06 567 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 FAM167BQ9BTA0 163 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 EPS8L2Q9H6S3 715 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 CAB39LQ9H9S4 337 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 OLAHQ9NV23 265 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 TMEM184CQ9NVA4 438 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 RIC8BQ9NVN3 520 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 TRMT6Q9UJA5 497 aaKnown RBP8.12□□□□□ -1.11
PABPC1-202ENST00000517403 SH3BGRL2Q9UJC5 107 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 TINAGQ9UJW2 476 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 HRH3Q9Y5N1 445 aa8.12□□□□□ -1.11
PABPC1-202ENST00000517403 EML6Q6ZMW3 1958 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 OTOGQ6ZRI0 2925 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 A0A0G2JMM0 328 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 MYOCOSA0A1B0GUC4 107 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 A0A1W2PPB8 328 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 A0A1W2PRS3 328 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ARHGAP10A1A4S6 786 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 KIR3DP1A8MWS1 328 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 H0YIG0 161 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ADAM10O14672 748 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ZNF354AO60765 605 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 UNC5CO95185 931 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 GUCA1CO95843 209 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 IGHEP01854 428 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 CD63P08962 238 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 SMIM10L1P0DMW3 83 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 PIM1P11309 404 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 PCSK2P16519 638 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 CD96P40200 585 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 RPL21P46778 160 aaKnown RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ITGA8P53708 1063 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 SLC26A5P58743 744 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 RAB8AP61006 207 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 SP140Q13342 867 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ABRAXAS2Q15018 415 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 EFTUD2Q15029 972 aaKnown RBP eCLIP8.11□□□□□ -1.116e-6■■□□□ 13.1
PABPC1-202ENST00000517403 C3AR1Q16581 482 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 BTBD16Q32M84 506 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 TTLL9Q3SXZ7 439 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ACER2Q5QJU3 275 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 THEMIS2Q5TEJ8 643 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 PLAG1Q6DJT9 500 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 SPINK14Q6IE38 97 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 CAPN13Q6MZZ7 669 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 PAPD4Q6PIY7 484 aaKnown RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 FAM180AQ6UWF9 173 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ZC3HC1Q86WB0 502 aaKnown RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 KLHL7Q8IXQ5 586 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 RPRMLQ8N4K4 120 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 GPATCH11Q8N954 259 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 MAGEC3Q8TD91 643 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 UTP15Q8TED0 518 aaKnown RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 CREB3L4Q8TEY5 395 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 TM9SF4Q92544 642 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 RERGQ96A58 199 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ESAMQ96AP7 390 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 FBXL8Q96CD0 374 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 SMIM10Q96HG1 83 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 CSF3RQ99062 836 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 SARGQ9BW04 601 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 RNF32Q9H0A6 362 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 PARVBQ9HBI1 364 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 KLHL1Q9NR64 748 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 ASIC3Q9UHC3 531 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
PABPC1-202ENST00000517403 MYO7BQ6PIF6 2116 aa8.11□□□□□ -1.11
PABPC1-202ENST00000517403 DCHS2Q6V1P9 2916 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 TRBC2A0A5B9 178 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 PINLYPA6NC86 204 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 TMEM200CA6NKL6 621 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 RNF223E7ERA6 249 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 E7ESA3 106 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 AP3B1O00203 1094 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 EIF3FO00303 357 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-202ENST00000517403 TAPBPO15533 448 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 NDUFS4O43181 175 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 CHST10O43529 356 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 PRAMEF2O60811 474 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 SEC31AO94979 1220 aaKnown RBP8.1□□□□□ -1.11
PABPC1-202ENST00000517403 CCNDBP1O95273 360 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 ANXA5P08758 320 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 POU3F2P20265 443 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-202ENST00000517403 TPP2P29144 1249 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-202ENST00000517403 RFC3P40938 356 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 HNF4AP41235 474 aa8.1□□□□□ -1.11
PABPC1-202ENST00000517403 SLC6A12P48065 614 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms