RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PTCD3Q96EY7 689 aaKnown RBP9.18□□□□□ -0.94
RNF4-221ENST00000513643 IMMP1LQ96LU5 166 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 QRFPRQ96P65 431 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 OR1F2PQ96R84 312 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 RHOXF2Q9BQY4 288 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 CRB3Q9BUF7 120 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 SLC25A23Q9BV35 468 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 VN1R1Q9GZP7 353 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 KLHL31Q9H511 634 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ANKZF1Q9H8Y5 726 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ATP13A2Q9NQ11 1180 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ZNF358Q9NW07 568 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 CD274Q9NZQ7 290 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ANAPC2Q9UJX6 822 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 FBXL4Q9UKA2 621 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 NAALAD2Q9Y3Q0 740 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ASH1LQ9NR48 2969 aaKnown RBP9.17□□□□□ -0.94
RNF4-221ENST00000513643 USP9XQ93008 2570 aaPredicted RBP9.17□□□□□ -0.94
RNF4-221ENST00000513643 IGHV1-45A0A0A0MS14 117 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 SYCE1LA8MT33 242 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 K7EPI3 171 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 FFAR3O14843 346 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 GPR42O15529 346 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 JRKO75564 520 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 KRT38O76015 456 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 HPP00738 406 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 SNRPAP09012 282 aaKnown RBP9.17□□□□□ -0.94
RNF4-221ENST00000513643 ALDH18A1P54886 795 aaKnown RBP9.17□□□□□ -0.94
RNF4-221ENST00000513643 RHAGQ02094 409 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 KLRB1Q12918 225 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 SLBPQ14493 270 aaKnown RBP eCLIP9.17□□□□□ -0.94
RNF4-221ENST00000513643 PCOLCEQ15113 449 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 RASA2Q15283 850 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 CRB2Q5IJ48 1285 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 VWA5B1Q5TIE3 1220 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 NDUFAF7Q7L592 441 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 UBE3DQ7Z6J8 389 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 PTRH1Q86Y79 214 aaKnown RBP9.17□□□□□ -0.94
RNF4-221ENST00000513643 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.17□□□□□ -0.943e-6■■■■■ 69.6
RNF4-221ENST00000513643 TBC1D19Q8N5T2 526 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 RBMXL3Q8N7X1 1067 aaKnown RBP9.17□□□□□ -0.94
RNF4-221ENST00000513643 CLEC1AQ8NC01 280 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 MS4A6EQ96DS6 147 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 WDR77Q9BQA1 342 aaPredicted RBP9.17□□□□□ -0.94
RNF4-221ENST00000513643 EFCAB11Q9BUY7 163 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 ZNF700Q9H0M5 742 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 ANKHQ9HCJ1 492 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 GPR83Q9NYM4 423 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 WWOXQ9NZC7 414 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 ZNF451Q9Y4E5 1061 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 CLDN16Q9Y5I7 305 aa9.17□□□□□ -0.94
RNF4-221ENST00000513643 IGKV3D-11A0A0A0MRZ8 115 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 TRIM49D1C9J1S8 452 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 E2F3O00716 465 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 CLGNO14967 610 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 CHST10O43529 356 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ALOX12BO75342 701 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 H2AFYO75367 372 aaKnown RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 RDH16O75452 317 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 SORBS2O94875 1100 aaKnown RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 B3GALT4O96024 378 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 RBP1P09455 135 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ZNF888P0CJ79 500 aaPredicted RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 ACPPP15309 386 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 HNRNPH1P31943 449 aaKnown RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 XCR1P46094 333 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 PGDP52209 483 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 RGS1Q08116 209 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 CHIT1Q13231 466 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 LAPTM5Q13571 262 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 RBBP5Q15291 538 aaKnown RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 UAP1Q16222 522 aaPredicted RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 RBBP7Q16576 425 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 TUBB8Q3ZCM7 444 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 DEFB134Q4QY38 66 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ADNP2Q6IQ32 1131 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ABHD17CQ6PCB6 329 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ATG14Q6ZNE5 492 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ABHD13Q7L211 337 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 LCA5Q86VQ0 697 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 CNPY4Q8N129 248 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 KRT78Q8N1N4 520 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 L3MBTL4Q8NA19 623 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 Q8NA96 180 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 OR5T3Q8NGG3 340 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 UHMK1Q8TAS1 419 aaKnown RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 ZCCHC10Q8TBK6 192 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ZNF473Q8WTR7 871 aaKnown RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 GAL3ST3Q96A11 431 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 C8orf44Q96CB5 159 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 MTBPQ96DY7 904 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 NPLQ9BXD5 320 aaPredicted RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 C1QTNF3Q9BXJ4 246 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 EPN3Q9H201 632 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 ZBTB20Q9HC78 741 aaPredicted RBP9.16□□□□□ -0.94
RNF4-221ENST00000513643 PRDM7Q9NQW5 492 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 PSD3Q9NYI0 1048 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 MKL2Q9ULH7 1088 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 POLEQ07864 2286 aa9.16□□□□□ -0.94
RNF4-221ENST00000513643 SCN3AQ9NY46 2000 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms