RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MOB2Q70IA6 237 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 LRRC8DQ7L1W4 858 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 CCDC71Q8IV32 467 aaPredicted RBP7.07□□□□□ -1.28
CPNE4-208ENST00000511604 SULF1Q8IWU6 871 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 SLC34A3Q8N130 599 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 LIX1Q8N485 282 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 CAMKVQ8NCB2 501 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 LINC00116Q8NCU8 138 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 WDR20Q8TBZ3 569 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 GLYATL2Q8WU03 294 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 POF1BQ8WVV4 589 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 APH1BQ8WW43 257 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 HTR3CQ8WXA8 447 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 NR4A3Q92570 626 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 KHSRPQ92945 711 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPNE4-208ENST00000511604 KIAA1143Q96AT1 154 aaPredicted RBP7.07□□□□□ -1.28
CPNE4-208ENST00000511604 CREB3L1Q96BA8 519 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 HS6ST2Q96MM7 605 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 PFDN5Q99471 154 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 LMAN2LQ9H0V9 348 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 MIXL1Q9H2W2 232 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 ACTR8Q9H981 624 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 SLC28A3Q9HAS3 691 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 AGO4Q9HCK5 861 aaKnown RBP7.07□□□□□ -1.28
CPNE4-208ENST00000511604 SDR39U1Q9NRG7 319 aaPredicted RBP7.07□□□□□ -1.28
CPNE4-208ENST00000511604 NDUFAF4Q9P032 175 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 PSORS1C1Q9UIG5 152 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 BTNL2Q9UIR0 455 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 GPR160Q9UJ42 338 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 SSR3Q9UNL2 185 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 PTCH2Q9Y6C5 1203 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 CDH10Q9Y6N8 788 aa7.07□□□□□ -1.28
CPNE4-208ENST00000511604 TEX46H3BTG2 121 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 SIGLEC5O15389 551 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 KDM4BO94953 1096 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 STBD1O95210 358 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GADD45GO95257 159 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 APBA3O96018 575 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 SLC10A3P09131 477 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 SLC2A2P11168 524 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GOT1P17174 413 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GPD1P21695 349 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 VAMP1P23763 118 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 DNASE1P24855 282 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 STOMP27105 288 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 SLC19A1P41440 591 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GPR143P51810 404 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ACTR1AP61163 376 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 SIGLEC14Q08ET2 396 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 CAMK2DQ13557 499 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 DOC2BQ14184 412 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 TKFCQ3LXA3 575 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ZNF789Q5FWF6 425 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 OR2B11Q5JQS5 317 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 DGKKQ5KSL6 1271 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 KIAA1614Q5VZ46 1190 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 LRRC66Q68CR7 880 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 NCBP2-AS2Q69YL0 99 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 EFCAB12Q6NXP0 572 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 C3P1Q6ZMU1 363 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 CDKL3Q8IVW4 592 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 C12orf29Q8N999 325 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 TTC29Q8NA56 475 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ATP6V1C2Q8NEY4 427 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 PHOSPHO1Q8TCT1 267 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 CLEC4CQ8WTT0 213 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 MRPS24Q96EL2 167 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 P2RY11Q96G91 374 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 MASTLQ96GX5 879 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ZNF419Q96HQ0 510 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 RAD9AQ99638 391 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 NTPCRQ9BSD7 190 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 MSTO1Q9BUK6 570 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 CNPPD1Q9BV87 410 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ELOVL4Q9GZR5 314 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ALX4Q9H161 411 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 BTRCQ9Y297 605 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 POM121CA8CG34 1229 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GTPBP1O00178 669 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 SLC31A2O15432 143 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 CA12O43570 354 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 MFSD11O43934 449 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 LZTS3O60299 673 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 BRINP1O60477 761 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 PRMT3O60678 531 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 RGS11O94810 467 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 C1RP00736 705 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 PRG2P13727 222 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 PAMP19021 973 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GGT1P19440 569 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 CXCL3P19876 107 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 PVALBP20472 110 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 UBA1P22314 1058 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 NNMTP40261 264 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 PTGER2P43116 358 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ZFP36L2P47974 494 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 XKP51811 444 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 TAS2R60P59551 318 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 BTG1P62324 171 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms