RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 STRA8Q7Z7C7 330 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 THOC6Q86W42 341 aaKnown RBP14.47□□□□□ -0.09
TPM3-219ENST00000509409 SRRM1Q8IYB3 904 aaKnown RBP14.47□□□□□ -0.09
TPM3-219ENST00000509409 AFAP1L2Q8N4X5 818 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 NKAPQ8N5F7 415 aaKnown RBP14.47□□□□□ -0.09
TPM3-219ENST00000509409 HORMAD2Q8N7B1 307 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 NT5CQ8TCD5 201 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 MARVELD3Q96A59 401 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 LRRC39Q96DD0 335 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 PDLIM5Q96HC4 596 aaKnown RBP14.47□□□□□ -0.09
TPM3-219ENST00000509409 SIGLEC12Q96PQ1 595 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 EGFL8Q99944 293 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 AIF1LQ9BQI0 150 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 TRIM31Q9BZY9 425 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 RHBGQ9H310 441 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 PLAC1Q9HBJ0 212 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 ZFATQ9P243 1243 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 ZGRF1Q86YA3 2104 aa14.47□□□□□ -0.09
TPM3-219ENST00000509409 DIDO1Q9BTC0 2240 aaKnown RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 GABRR3A8MPY1 467 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 PSMD12O00232 456 aaPredicted RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 CDC7O00311 574 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 HNRNPRO43390 633 aaKnown RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 PRMT3O60678 531 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 H2AFYO75367 372 aaKnown RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 MLYCDO95822 493 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 EEF1DP29692 281 aaKnown RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 AHRP35869 848 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 SLC26A5P58743 744 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 RAB8AP61006 207 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 ALDH6A1Q02252 535 aaKnown RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 MGAT5Q09328 741 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 NAA30Q147X3 362 aaPredicted RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.46□□□□□ -0.092e-17■□□□□ 10.2
TPM3-219ENST00000509409 STEAP4Q687X5 459 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 NXPE4Q6UWF7 544 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 TMPRSS11BQ86T26 416 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 TRPV3Q8NET8 790 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 UTP15Q8TED0 518 aaKnown RBP14.46□□□□□ -0.09
TPM3-219ENST00000509409 SPNS1Q9H2V7 528 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 PELI2Q9HAT8 420 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 IKZF3Q9UKT9 509 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 ENTPD4Q9Y227 616 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 SLC22A14Q9Y267 594 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 PCDHGB6Q9Y5F9 930 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 TEX264Q9Y6I9 313 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 KCNE2Q9Y6J6 123 aa14.46□□□□□ -0.09
TPM3-219ENST00000509409 SCN3AQ9NY46 2000 aa14.46□□□□□ -0.1
TPM3-219ENST00000509409 NPEPPSL1A6NEC2 478 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 ENO4A6NNW6 628 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 A8MUA0 341 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 MAN1A2O60476 641 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 ESRRAP11474 423 aaPredicted RBP14.45□□□□□ -0.1
TPM3-219ENST00000509409 PAFAH1B1P43034 410 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 GNG11P61952 73 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 BTG2P78543 158 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 PDIA2Q13087 525 aaKnown RBP14.45□□□□□ -0.1
TPM3-219ENST00000509409 SLC25A25Q6KCM7 469 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 MTFR2Q6P444 385 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 SBSNQ6UWP8 590 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 FRA10AC1Q70Z53 315 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 MRGPRGQ86SM5 289 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 RPS19BP1Q86WX3 136 aaKnown RBP14.45□□□□□ -0.1
TPM3-219ENST00000509409 TMEM178AQ8NBL3 297 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 FAM98AQ8NCA5 519 aaKnown RBP14.45□□□□□ -0.1
TPM3-219ENST00000509409 FBXO36Q8NEA4 188 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 ARMC2Q8NEN0 867 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 VPS39Q96JC1 886 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 NPAS2Q99743 824 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 TRIM51Q9BSJ1 452 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 HES7Q9BYE0 225 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 KLHL31Q9H511 634 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 RUBCNLQ9H714 662 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 CTNNAL1Q9UBT7 734 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 CENPEQ02224 2701 aa14.45□□□□□ -0.1
TPM3-219ENST00000509409 CELSR2Q9HCU4 2923 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 FAM95CA0A1B0GW59 222 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 NPIPA5E9PKD4 350 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 WISP2O76076 250 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 SP1P08047 785 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 RNH1P13489 461 aaKnown RBP14.44□□□□□ -0.1
TPM3-219ENST00000509409 CA7P43166 264 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 SLC12A2P55011 1212 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 REEP5Q00765 189 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 ART3Q13508 389 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 ZNF460Q14592 562 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 MAPKAPK3Q16644 382 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 KRTCAP3Q53RY4 240 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 TOR1AIP1Q5JTV8 583 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 GALNTL5Q7Z4T8 443 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.44□□□□□ -0.1
TPM3-219ENST00000509409 KIF2BQ8N4N8 673 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 ANKRD53Q8N9V6 530 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 MDS2Q8NDY4 140 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 ITLN2Q8WWU7 325 aaPredicted RBP14.44□□□□□ -0.1
TPM3-219ENST00000509409 CCT6BQ92526 530 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 CCDC120Q96HB5 630 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 MAGED4Q96JG8 741 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 FAR2Q96K12 515 aa14.44□□□□□ -0.1
TPM3-219ENST00000509409 WDR83Q9BRX9 315 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms