RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 SH3BGRL2Q9UJC5 107 aa3.8□□□□□ -1.8
USP54-217ENST00000498213 CAPN11Q9UMQ6 739 aa3.8□□□□□ -1.8
USP54-217ENST00000498213 RPL26L1Q9UNX3 145 aaKnown RBP3.8□□□□□ -1.8
USP54-217ENST00000498213 GPR34Q9UPC5 381 aa3.8□□□□□ -1.8
USP54-217ENST00000498213 PLEKHA6Q9Y2H5 1048 aa3.8□□□□□ -1.8
USP54-217ENST00000498213 TMEM184BQ9Y519 407 aaPredicted RBP3.8□□□□□ -1.8
USP54-217ENST00000498213 MYO7BQ6PIF6 2116 aa3.8□□□□□ -1.8
USP54-217ENST00000498213 SONP18583 2426 aaKnown RBP3.8□□□□□ -1.8
USP54-217ENST00000498213 SCN8AQ9UQD0 1980 aa3.8□□□□□ -1.8
USP54-217ENST00000498213 TRPM6Q9BX84 2022 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 A0A0D9SEW6 157 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 ARHGAP42A6NI28 874 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 CCL21O00585 134 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 E2F3O00716 465 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 KPNA5O15131 536 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 RAD51BO15315 384 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 INSIG1O15503 277 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 B4GAT1O43505 415 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 CREG1O75629 220 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 ADCY5O95622 1261 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 CD160O95971 181 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 CALB1P05937 261 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 TPM2P07951 284 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 THRAP10827 490 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 CCNB1P14635 433 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 MMP8P22894 467 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 RRM1P23921 792 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 EEF1GP26641 437 aaKnown RBP3.79□□□□□ -1.8
USP54-217ENST00000498213 ALDH4A1P30038 563 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 RFC1P35251 1148 aaPredicted RBP3.79□□□□□ -1.8
USP54-217ENST00000498213 MMP12P39900 470 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 VPS41P49754 854 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 SULT1E1P49888 294 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 KCNK10P57789 538 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 RAE1P78406 368 aaKnown RBP3.79□□□□□ -1.8
USP54-217ENST00000498213 B4GALNT1Q00973 533 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 FOLH1Q04609 750 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 BIRC2Q13490 618 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 ALG11Q2TAA5 492 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 WSCD2Q2TBF2 565 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 P3H1Q32P28 736 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 ALFQ53S48 1182 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 GRHL2Q6ISB3 625 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 DENND1BQ6P3S1 775 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 BHLHB9Q6PI77 547 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 CLEC17AQ6ZS10 378 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 DPPA4Q7L190 304 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 RRAGAQ7L523 313 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 KMT5CQ86Y97 462 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 PHF13Q86YI8 300 aaPredicted RBP3.79□□□□□ -1.8
USP54-217ENST00000498213 UEVLDQ8IX04 471 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 WDTC1Q8N5D0 677 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 ARFGAP1Q8N6T3 406 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 CLEC4CQ8WTT0 213 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 ZFPM2Q8WW38 1151 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 NELFBQ8WX92 580 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 INPP5DQ92835 1189 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 PMM1Q92871 262 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 RTP4Q96DX8 246 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 IP6K3Q96PC2 410 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 PSKH2Q96QS6 385 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 C19orf43Q9BQ61 176 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 C17orf62Q9BQA9 187 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 TRMOQ9BU70 441 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 SELENOOQ9BVL4 669 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 STK33Q9BYT3 514 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 RAB33BQ9H082 229 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 PDCL3Q9H2J4 239 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 SYTL2Q9HCH5 934 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 APMAPQ9HDC9 416 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 PLCB1Q9NQ66 1216 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 FGF21Q9NSA1 209 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 MYO6Q9UM54 1294 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 B3GNT3Q9Y2A9 372 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 SLC17A4Q9Y2C5 497 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 PPIL1Q9Y3C6 166 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 HS3ST3B1Q9Y662 390 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 UNC13CQ8NB66 2214 aa3.79□□□□□ -1.8
USP54-217ENST00000498213 LILRA5A6NI73 299 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 C2CD4BA6NLJ0 364 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 SIGLEC16A6NMB1 481 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 A8MU76 341 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 BECN2A8MW95 431 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 ZSCAN9O15535 394 aaPredicted RBP3.78□□□□□ -1.8
USP54-217ENST00000498213 PHF1O43189 567 aaPredicted RBP3.78□□□□□ -1.8
USP54-217ENST00000498213 SMAD6O43541 496 aaKnown RBP3.78□□□□□ -1.8
USP54-217ENST00000498213 BUB1O43683 1085 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 SNAP91O60641 907 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 PRAMEF11O60813 436 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 TMCC1O94876 653 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 NTN1O95631 604 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 PLAUP00749 431 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 UGT2B4P06133 528 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 PLEKP08567 350 aaPredicted RBP3.78□□□□□ -1.8
USP54-217ENST00000498213 KRT3P12035 628 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 PON1P27169 355 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 CASP14P31944 242 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 PBX1P40424 430 aa3.78□□□□□ -1.8
USP54-217ENST00000498213 GARSP41250 739 aaKnown RBP3.78□□□□□ -1.8
USP54-217ENST00000498213 GSTM5P46439 218 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms