RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 LANCL3Q6ZV70 420 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 CCDC91Q7Z6B0 441 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 CISD2Q8N5K1 135 aaKnown RBP14.83□□□□□ -0.04
HDAC4-213ENST00000496347 ANKRD53Q8N9V6 530 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 PDPRQ8NCN5 879 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 TBC1D20Q96BZ9 403 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 MOCOSQ96EN8 888 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 C19orf60Q96EN9 201 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 UBXN10Q96LJ8 280 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 C16orf45Q96MC5 204 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-213ENST00000496347 CYTH2Q99418 400 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 CAPS2Q9BXY5 557 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 LRRC4CQ9HCJ2 640 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 LANCL2Q9NS86 450 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 PTGFRNQ9P2B2 879 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 COPG2Q9UBF2 871 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 TEKT2Q9UIF3 430 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 COPG1Q9Y678 874 aaKnown RBP14.83□□□□□ -0.04
HDAC4-213ENST00000496347 TRAV17A0A0B4J275 112 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 NCF1BA6NI72 391 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-213ENST00000496347 NCF1CA8MVU1 366 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-213ENST00000496347 MAGEB17A8MXT2 336 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 WFS1O76024 890 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 SEC24DO94855 1032 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-213ENST00000496347 AGFG2O95081 481 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 NCF1P14598 390 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-213ENST00000496347 HPDP32754 393 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-213ENST00000496347 GGT5P36269 586 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 RHAGQ02094 409 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 NR6A1Q15406 480 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 SULT1C3Q6IMI6 304 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 SLCO4C1Q6ZQN7 724 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 CEP128Q6ZU80 1094 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 ANKRD37Q7Z713 158 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 ZGRF1Q86YA3 2104 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 GPSM1Q86YR5 675 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.82□□□□□ -0.04
HDAC4-213ENST00000496347 SIRT6Q8N6T7 355 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 PPM1NQ8N819 430 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 OR5T3Q8NGG3 340 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 UTP15Q8TED0 518 aaKnown RBP14.82□□□□□ -0.04
HDAC4-213ENST00000496347 KIAA1191Q96A73 305 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 PEX11GQ96HA9 241 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 TMEM79Q9BSE2 394 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 RBCK1Q9BYM8 510 aa14.82□□□□□ -0.04
HDAC4-213ENST00000496347 DIDO1Q9BTC0 2240 aaKnown RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 ESYT3A0FGR9 886 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 CDC123O75794 336 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 S100BP04271 92 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 CELA2AP08217 269 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 SLC35E2BP0CK96 405 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 ITGAMP11215 1152 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 GLRBP48167 497 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 TNFSF10P50591 281 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 STXBP1P61764 594 aaKnown RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 MRPL49Q13405 166 aaKnown RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 SLBPQ14493 270 aaKnown RBP eCLIP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 RBBP5Q15291 538 aaKnown RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 OR4D1Q15615 310 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 NSDHLQ15738 373 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 ABHD17BQ5VST6 288 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 RPUSD3Q6P087 351 aaKnown RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 FAM180AQ6UWF9 173 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 TMIGD1Q6UXZ0 262 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 QSOX2Q6ZRP7 698 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 LRRC70Q7Z2Q7 622 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 KRT78Q8N1N4 520 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 PLPP5Q8NEB5 264 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 FBF1Q8TES7 1133 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 CREB3L4Q8TEY5 395 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 GAL3ST3Q96A11 431 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 LPAR4Q99677 370 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 UNKQ9C0B0 810 aaKnown RBP14.81□□□□□ -0.04
HDAC4-213ENST00000496347 ZDHHC18Q9NUE0 388 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 DNAJC11Q9NVH1 559 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 NTNG1Q9Y2I2 539 aa14.81□□□□□ -0.04
HDAC4-213ENST00000496347 CENPEQ02224 2701 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 A0A088AWK7 358 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 CCDC189A1A4V9 331 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 ANKUB1A6NFN9 424 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 H2AFYO75367 372 aaKnown RBP14.8□□□□□ -0.04
HDAC4-213ENST00000496347 STK16O75716 305 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 CBX6O95503 412 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 C1GALT1C1LP0DN25 315 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 ZNF10P21506 573 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-213ENST00000496347 CRABP2P29373 138 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 GDF5P43026 501 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 GUCY2DQ02846 1103 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 HYAL2Q12891 473 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 ELOAQ14241 798 aaKnown RBP14.8□□□□□ -0.04
HDAC4-213ENST00000496347 TRADDQ15628 312 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 PDK4Q16654 411 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 BTBD16Q32M84 506 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 PAPD4Q6PIY7 484 aaKnown RBP14.8□□□□□ -0.04
HDAC4-213ENST00000496347 RAPH1Q70E73 1250 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 TBC1D1Q86TI0 1168 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-213ENST00000496347 SPATA6LQ8N4H0 392 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 ST6GALNAC3Q8NDV1 305 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 HAS2Q92819 552 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 WDR34Q96EX3 536 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms