RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	UBTD2	Q8WUN7	234 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	METTL21A	Q8WXB1	218 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	WDR34	Q96EX3	536 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	SMIM10	Q96HG1	83 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	ATOH8	Q96SQ7	321 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	TUBB6	Q9BUF5	446 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	MFRP	Q9BY79	579 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	EPS8L2	Q9H6S3	715 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	ALG9	Q9H6U8	611 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	NT5DC2	Q9H857	520 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	CLK4	Q9HAZ1	481 aa	Known RBP	12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	NMRAL1	Q9HBL8	299 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	ZBTB20	Q9HC78	741 aa	Predicted RBP	12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	CD274	Q9NZQ7	290 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	PTBP2	Q9UKA9	531 aa	Known RBP	12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	FLNB	O75369	2602 aa	Known RBP	12.59	□□□□□ -0.39
RBM28-208	ENST00000495327	LRRK2	Q5S007	2527 aa		12.59	□□□□□ -0.39
RBM28-208	ENST00000495327		A0A087X1B8	175 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	HMX2	A2RU54	273 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	ZNF860	A6NHJ4	632 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	ZIC2	O95409	532 aa	Predicted RBP	12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	SERPIND1	P05546	499 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	SOX11	P35716	441 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	GMPR	P36959	345 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	HSPA7	P48741	367 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	SERPINB8	P50452	374 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	RHAG	Q02094	409 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	MFAP5	Q13361	173 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	BMPR2	Q13873	1038 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	E2F2	Q14209	437 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	RBBP5	Q15291	538 aa	Known RBP	12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	INPP5J	Q15735	1006 aa	Predicted RBP	12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	PDK4	Q16654	411 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	CRB2	Q5IJ48	1285 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	UBAP2	Q5T6F2	1119 aa	Known RBP	12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	MFSD4B	Q5TF39	518 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	FAAH2	Q6GMR7	532 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	ISLR2	Q6UXK2	745 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	IQCK	Q8N0W5	287 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	SHISA5	Q8N114	240 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	KRT78	Q8N1N4	520 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	CEP112	Q8N8E3	955 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	GALNT11	Q8NCW6	608 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	OR5T3	Q8NGG3	340 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	RHEBL1	Q8TAI7	183 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	GAL3ST3	Q96A11	431 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	IMMP1L	Q96LU5	166 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	SNX15	Q9NRS6	342 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	LANCL2	Q9NS86	450 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	IGSF5	Q9NSI5	407 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	LUZP4	Q9P127	313 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	ACOT9	Q9Y305	439 aa		12.58	□□□□□ -0.4
RBM28-208	ENST00000495327	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CNTRL	Q7Z7A1	2325 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	USP9X	Q93008	2570 aa	Predicted RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CLEC18A	A5D8T8	446 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	C4orf51	C9J302	202 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CLGN	O14967	610 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	H2AFY	O75367	372 aa	Known RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CLEC3A	O75596	197 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	ALDOA	P04075	364 aa	Known RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	C2	P06681	752 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	FH	P07954	510 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	ICAM2	P13598	275 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	EPOR	P19235	508 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	JAK1	P23458	1154 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	HPD	P32754	393 aa	Predicted RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	STXBP1	P61764	594 aa	Known RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	PLEKHN1	Q494U1	663 aa	Predicted RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	PRR30	Q53SZ7	412 aa	Predicted RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	MROH9	Q5TGP6	573 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CLEC18B	Q6UXF7	455 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	LANCL3	Q6ZV70	420 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	ANKRD37	Q7Z713	158 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CLEC18C	Q8NCF0	446 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	PLPP5	Q8NEB5	264 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	BRIX1	Q8TDN6	353 aa	Known RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	SLC44A1	Q8WWI5	657 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	PSMF1	Q92530	271 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	EXT2	Q93063	718 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	ISL2	Q96A47	359 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	TBC1D20	Q96BZ9	403 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	TRIM44	Q96DX7	344 aa	Predicted RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	PTCD3	Q96EY7	689 aa	Known RBP	12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	PEX11G	Q96HA9	241 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	LMF1	Q96S06	567 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	EFCAB11	Q9BUY7	163 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	CD244	Q9BZW8	370 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	AICDA	Q9GZX7	198 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	PCDHGA10	Q9Y5H3	936 aa		12.57	□□□□□ -0.4
RBM28-208	ENST00000495327	SYCE1L	A8MT33	242 aa		12.56	□□□□□ -0.4
RBM28-208	ENST00000495327	MAGEB17	A8MXT2	336 aa		12.56	□□□□□ -0.4
RBM28-208	ENST00000495327	SUPT3H	B4E1H0	165 aa		12.56	□□□□□ -0.4
RBM28-208	ENST00000495327	CHST10	O43529	356 aa		12.56	□□□□□ -0.4
RBM28-208	ENST00000495327	PRAMEF4	O60810	478 aa		12.56	□□□□□ -0.4
RBM28-208	ENST00000495327	VPS4B	O75351	444 aa		12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms