RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	ZNF211	Q13398	564 aa	Predicted RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	KRR1	Q13601	381 aa	Known RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	TFDP2	Q14188	446 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	HABP2	Q14520	560 aa	Predicted RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF235	Q14590	738 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF169	Q14929	603 aa	Predicted RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	ODF1	Q14990	250 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	TRAM2	Q15035	370 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	INAVA	Q3KP66	663 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	SFT2D3	Q587I9	215 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	SULT1C3	Q6IMI6	304 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	TYW3	Q6IPR3	259 aa	Known RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	TCEAL6	Q6IPX3	200 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	ANKRD26P1	Q6NSI1	321 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF544	Q6NX49	715 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	FDX2	Q6P4F2	183 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	DPY19L3	Q6ZPD9	716 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	PTCHD4	Q6ZW05	846 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	CHSY3	Q70JA7	882 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	DPPA2	Q7Z7J5	298 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZFAND4	Q86XD8	727 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	ATG16L2	Q8NAA4	619 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	CCNY	Q8ND76	341 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	TSPAN14	Q8NG11	270 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	OR2AP1	Q8NGE2	309 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	GTF2H4	Q92759	462 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	SGTB	Q96EQ0	304 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	SSX3	Q99909	188 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	DUSP26	Q9BV47	211 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	GSDMC	Q9BYG8	508 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	TREM1	Q9NP99	234 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	SMOX	Q9NWM0	555 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	SAE1	Q9UBE0	346 aa	Predicted RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	TRHDE	Q9UKU6	1024 aa		11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.18	□□□□□ -0.62
BRCA1-222	ENST00000493919	EFCAB7	A8K855	629 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	C1QTNF3-AMACR	E9PGA6	284 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919		J3QRK9	145 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	HR	O43593	1189 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	MAFK	O60675	156 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF217	O75362	1048 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF821	O75541	412 aa	Predicted RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	OR4E1	P0C645	316 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	TRAPPC2	P0DI81	140 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	TRAPPC2B	P0DI82	140 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF8	P17098	575 aa	Predicted RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	BCKDHB	P21953	392 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GK	P32189	559 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	CHRNA3	P32297	505 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	DDOST	P39656	456 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	DHPS	P49366	369 aa	Predicted RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	METAP1	P53582	386 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	HTD2	P86397	168 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	NHLH1	Q02575	133 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GALNT2	Q10471	571 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF805	Q5CZA5	627 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	CARD16	Q5EG05	197 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	SLC5A11	Q8WWX8	675 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	FUBP1	Q96AE4	644 aa	Known RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	FBXL8	Q96CD0	374 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	FAM129B	Q96TA1	746 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	METTL9	Q9H1A3	318 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ADPRHL2	Q9NX46	363 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	IL36A	Q9UHA7	158 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	SARDH	Q9UL12	918 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	CXorf51A	A0A1B0GTR3	108 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919		A0A1W2PP55	124 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	TRABD2B	A6NFA1	517 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	FOXO6	A8MYZ6	492 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	DDX3Y	O15523	660 aa	Known RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	SEC22B	O75396	215 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	CRCP	O75575	148 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	PDE9A	O76083	593 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	NDST3	O95803	873 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ADH1B	P00325	375 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GSR	P00390	522 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	CTSL	P07711	333 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GRK3	P35626	688 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GPX4	P36969	197 aa	Predicted RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	P2RY2	P41231	377 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GBX2	P52951	348 aa	Predicted RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	RPL6	Q02878	288 aa	Known RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	SLC10A7	Q0GE19	358 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	SLC10A2	Q12908	348 aa	Predicted RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ARSI	Q5FYB1	569 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ARMCX4	Q5H9R4	360 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	RAET1G	Q6H3X3	334 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	CFAP77	Q6ZQR2	320 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	USP45	Q70EL2	814 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GPAT4	Q86UL3	456 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	PLCZ1	Q86YW0	608 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	OR7G3	Q8NG95	312 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	OR13C3	Q8NGS6	347 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	FBXO27	Q8NI29	283 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ROBO4	Q8WZ75	1007 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ST8SIA4	Q92187	359 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	ISG20	Q96AZ6	181 aa	Known RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	LGMN	Q99538	433 aa		11.17	□□□□□ -0.62

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