RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 VPS50Q96JG6 964 aa8.56□□□□□ -1.04
GTF3C5-210ENST00000489842 NAP1L3Q99457 506 aaPredicted RBP8.56□□□□□ -1.04
GTF3C5-210ENST00000489842 LIN28AQ9H9Z2 209 aaKnown RBP8.56□□□□□ -1.04
GTF3C5-210ENST00000489842 SEC14L3Q9UDX4 400 aa8.56□□□□□ -1.04
GTF3C5-210ENST00000489842 TINAGQ9UJW2 476 aa8.56□□□□□ -1.04
GTF3C5-210ENST00000489842 FBN2P35556 2912 aa8.56□□□□□ -1.04
GTF3C5-210ENST00000489842 NOTCH2Q04721 2471 aa8.56□□□□□ -1.04
GTF3C5-210ENST00000489842 TRBC2A0A5B9 178 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 GABRR3A8MPY1 467 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 EIF3FO00303 357 aaPredicted RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 CCL21O00585 134 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 PHGDHO43175 533 aaKnown RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 SH3BGRLO75368 114 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 TTC4O95801 387 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 FHP07954 510 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 HIST1H2AGP0C0S8 130 aaPredicted RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 ZNF37AP17032 561 aaPredicted RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 ALOX12P18054 663 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 HIST1H2ADP20671 130 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 SSTR1P30872 391 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 RFC3P40938 356 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 SCTRP47872 440 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 SLC26A5P58743 744 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 GNG11P61952 73 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 REEP5Q00765 189 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 DR1Q01658 176 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 OC90Q02509 493 aaPredicted RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 SP140Q13342 867 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 RUNX2Q13950 521 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 CSHL1Q14406 222 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 USP10Q14694 798 aaKnown RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 OR1C1Q15619 314 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 TRADDQ15628 312 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 ARMC3Q5W041 872 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 PLAG1Q6DJT9 500 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 FAM45BPQ6NSW5 357 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 H3F3CQ6NXT2 135 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 NXPE4Q6UWF7 544 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 C3P1Q6ZMU1 363 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 RIPOR1Q6ZS17 1223 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 GALNTL5Q7Z4T8 443 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 STRA8Q7Z7C7 330 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 ZC3HC1Q86WB0 502 aaKnown RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 MDS2Q8NDY4 140 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 PLPP5Q8NEB5 264 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 FAM45AQ8TCE6 357 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 ITLN2Q8WWU7 325 aaPredicted RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 CCDC120Q96HB5 630 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 HIST1H2AHQ96KK5 128 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 KRT12Q99456 494 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 HIST1H2AJQ99878 128 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 H2AFJQ9BTM1 129 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 PCBD2Q9H0N5 130 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 DPH5Q9H2P9 285 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 MTO1Q9Y2Z2 717 aaKnown RBP8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 ASB1Q9Y576 335 aa8.55□□□□□ -1.04
GTF3C5-210ENST00000489842 EML6Q6ZMW3 1958 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 NPIPA5E9PKD4 350 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 C19orf84I3L1E1 186 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 CES2O00748 559 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 TAPBPO15533 448 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 ZSCAN12O43309 604 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 PRKNO60260 465 aaPredicted RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 FAM155BO75949 473 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 NEURL1O76050 574 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 WDR47O94967 919 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 SEC31AO94979 1220 aaKnown RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 TBX6O95947 436 aaPredicted RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 SLC35G6P0C7Q6 338 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 SMIM10L1P0DMW3 83 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 HRH2P25021 359 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 TPP2P29144 1249 aaPredicted RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 HNRNPH1P31943 449 aaKnown RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 GRK3P35626 688 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 ADORA2A-AS1P86434 159 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 MGAT5Q09328 741 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 MORF4L2Q15014 288 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 OR4D1Q15615 310 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 UBAP2Q5T6F2 1119 aaKnown RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 FAM219BQ5XKK7 198 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 KIAA0408Q6ZU52 694 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 VN1R5Q7Z5H4 357 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 FGD2Q7Z6J4 655 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 PDIK1LQ8N165 341 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 CA13Q8N1Q1 262 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 RNF175Q8N4F7 328 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 CPSF7Q8N684 471 aaKnown RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 NFAM1Q8NET5 270 aaPredicted RBP8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 NT5CQ8TCD5 201 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 DOK4Q8TEW6 326 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 CREB3L4Q8TEY5 395 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 SLCO2A1Q92959 643 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 MARVELD3Q96A59 401 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 TBC1D20Q96BZ9 403 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 THAP11Q96EK4 314 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 SMIM10Q96HG1 83 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 ZNF354BQ96LW1 612 aa8.54□□□□□ -1.04
GTF3C5-210ENST00000489842 PTCHD1Q96NR3 888 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms