RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 RAB8AP61006 207 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 ABRAXAS2Q15018 415 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 TOR1AIP1Q5JTV8 583 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 RIPOR1Q6ZS17 1223 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 CPEB2Q7Z5Q1 589 aaKnown RBP16.74■□□□□ 0.27
ITGB1-215ENST00000488494 ANKRD37Q7Z713 158 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 TBC1D1Q86TI0 1168 aaPredicted RBP16.74■□□□□ 0.27
ITGB1-215ENST00000488494 MMGT1Q8N4V1 131 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 CISD2Q8N5K1 135 aaKnown RBP16.74■□□□□ 0.27
ITGB1-215ENST00000488494 PDPRQ8NCN5 879 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 MNS1Q8NEH6 495 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 TRPV3Q8NET8 790 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 UTP15Q8TED0 518 aaKnown RBP16.74■□□□□ 0.27
ITGB1-215ENST00000488494 KIAA1191Q96A73 305 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 ESAMQ96AP7 390 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 SNRNP40Q96DI7 357 aaKnown RBP16.74■□□□□ 0.27
ITGB1-215ENST00000488494 CYTH2Q99418 400 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 TUBB6Q9BUF5 446 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 LANCL2Q9NS86 450 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 DNAJC11Q9NVH1 559 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 NINJ2Q9NZG7 142 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 C19orf25Q9UFG5 118 aaPredicted RBP16.74■□□□□ 0.27
ITGB1-215ENST00000488494 DOCK10Q96BY6 2186 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 SHANK1Q9Y566 2161 aa16.74■□□□□ 0.27
ITGB1-215ENST00000488494 CLEC18AA5D8T8 446 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 SUPT3HB4E1H0 165 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 DNAJB6O75190 326 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 SUPT3HO75486 399 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 ITGAMP11215 1152 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 TFEBP19484 476 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 CRABP2P29373 138 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 GGT5P36269 586 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 RHAGQ02094 409 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 HYAL2Q12891 473 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 DLG1Q12959 904 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 UAP1Q16222 522 aaPredicted RBP16.73■□□□□ 0.27
ITGB1-215ENST00000488494 PDK4Q16654 411 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 CDKL4Q5MAI5 379 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 SULT1C3Q6IMI6 304 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 NIPAL1Q6NVV3 410 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 CLEC18BQ6UXF7 455 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 CLEC18CQ8NCF0 446 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 DNAJB14Q8TBM8 379 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 CREB3L4Q8TEY5 395 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 PSMF1Q92530 271 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 TSLPQ969D9 159 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 KLHL31Q9H511 634 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 IGSF5Q9NSI5 407 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 ASF1BQ9NVP2 202 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 GPRC5BQ9NZH0 403 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 NUDT4Q9NZJ9 180 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 MTRF1LQ9UGC7 380 aaKnown RBP16.73■□□□□ 0.27
ITGB1-215ENST00000488494 DMGDHQ9UI17 866 aaKnown RBP16.73■□□□□ 0.27
ITGB1-215ENST00000488494 ASB1Q9Y576 335 aa16.73■□□□□ 0.27
ITGB1-215ENST00000488494 URADA6NGE7 173 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 TCP11X1B4DZS4 312 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 CHST10O43529 356 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 CCNT2O60583 730 aaKnown RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 H2AFYO75367 372 aaKnown RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 STK16O75716 305 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 FHP07954 510 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 SERPINA6P08185 405 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 LTA4HP09960 611 aaKnown RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 CTAGE8P0CG41 777 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 IL10P22301 178 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 PHBP35232 272 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 GLRBP48167 497 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 AGTR2P50052 363 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 AP2B1P63010 937 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 ARG2P78540 354 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 IRF9Q00978 393 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 SRSF1Q07955 248 aaKnown RBP eCLIP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 MRPL49Q13405 166 aaKnown RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 UBAP2LQ14157 1087 aaKnown RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 ZNF169Q14929 603 aaPredicted RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 MROH9Q5TGP6 573 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 B3GNTL1Q67FW5 361 aaPredicted RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 TMIGD1Q6UXZ0 262 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 CTAGE4Q8IX94 777 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 KRT78Q8N1N4 520 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 FAM26EQ8N5C1 309 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 CCT6BQ92526 530 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 TBC1D20Q96BZ9 403 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 IMMP1LQ96LU5 166 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 AICDAQ9GZX7 198 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 ACSS3Q9H6R3 686 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 NMRAL1Q9HBL8 299 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 SNX15Q9NRS6 342 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 NTNG1Q9Y2I2 539 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 UTP20O75691 2785 aaKnown RBP16.72■□□□□ 0.27
ITGB1-215ENST00000488494 SCN3AQ9NY46 2000 aa16.72■□□□□ 0.27
ITGB1-215ENST00000488494 UBXN8O00124 270 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 CLGNO14967 610 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 KERAO60938 352 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 WFS1O76024 890 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 ACSL3O95573 720 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 JAK1P23458 1154 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 HNRNPH1P31943 449 aaKnown RBP16.71■□□□□ 0.27
ITGB1-215ENST00000488494 KCNC1P48547 511 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 STXBP1P61764 594 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms