RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 SKP1P63208 163 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 TGM3Q08188 693 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 MUM1Q2TAK8 710 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 HKDC1Q2TB90 917 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 GARNL3Q5VVW2 1013 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 FRG2Q64ET8 278 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 LETMD1Q6P1Q0 360 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 CHSY3Q70JA7 882 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 ABHD13Q7L211 337 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 CUZD1Q86UP6 607 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.81□□□□□ -0.84
SKA1-204ENST00000488454 KIRREL3Q8IZU9 778 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 CLYBLQ8N0X4 340 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 AFAP1L2Q8N4X5 818 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 ANKRD53Q8N9V6 530 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 HUS1BQ8NHY5 278 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 NT5CQ8TCD5 201 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 LRRC8CQ8TDW0 803 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 AGAP11Q8TF27 550 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 SELENOMQ8WWX9 145 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 TM4SF19Q96DZ7 209 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 CMTM7Q96FZ5 175 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 ZNF285Q96NJ3 590 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 FRG2BQ96QU4 278 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 MACROD1Q9BQ69 325 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 SLC29A3Q9BZD2 475 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 ULBP3Q9BZM4 244 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 ILKAPQ9H0C8 392 aaPredicted RBP9.81□□□□□ -0.84
SKA1-204ENST00000488454 ACTR5Q9H9F9 607 aaPredicted RBP9.81□□□□□ -0.84
SKA1-204ENST00000488454 PFDN4Q9NQP4 134 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 NMRK1Q9NWW6 199 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 NDOR1Q9UHB4 597 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 CDC14AQ9UNH5 594 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 WASF3Q9UPY6 502 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 RUVBL1Q9Y265 456 aaKnown RBP9.81□□□□□ -0.84
SKA1-204ENST00000488454 PCDHGA7Q9Y5G6 932 aa9.81□□□□□ -0.84
SKA1-204ENST00000488454 KNTC1P50748 2209 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 PCM1Q15154 2024 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 A0A088AWK7 358 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 PMS2P1A4D2B8 440 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 SLC35F4A4IF30 521 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 FITM1A5D6W6 292 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 C9orf172C9J069 976 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 FOXE1O00358 373 aaPredicted RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 UBFD1O14562 309 aaKnown RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 AZIN1O14977 448 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 BRINP1O60477 761 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 STK17BO94768 372 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 KIAA0754O94854 1291 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 TGFB1P01137 390 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 STATHP02808 62 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 CTSBP07858 339 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 FGF4P08620 206 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 UROSP10746 265 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 PIM1P11309 404 aaPredicted RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 ZNF10P21506 573 aaPredicted RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 AGXTP21549 392 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 SLC5A2P31639 672 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 CCR10P46092 362 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 AVPR1BP47901 424 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 NEK2P51955 445 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 SHC2P98077 582 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 ZNF33BQ06732 778 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 PRTGQ2VWP7 1150 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 TMEM35AQ53FP2 167 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 TOR1AIP1Q5JTV8 583 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 SH2D4BQ5SQS7 431 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 PRAMEF17Q5VTA0 474 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 NIPAL1Q6NVV3 410 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 IGF2-ASQ6U949 168 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 TTLL10Q6ZVT0 673 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 VN1R4Q7Z5H5 301 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 KCT2Q8NC54 265 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 SRFBP1Q8NEF9 429 aaKnown RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 OR6Y1Q8NGX8 325 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 FAM76AQ8TAV0 307 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 CREB3L4Q8TEY5 395 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 ZNF473Q8WTR7 871 aaKnown RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 ZNF75CPQ92670 426 aaPredicted RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 FAR2Q96K12 515 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 ZNF578Q96N58 590 aaPredicted RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 MTERF1Q99551 399 aaKnown RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 ANKHQ9HCJ1 492 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 ENAMQ9NRM1 1142 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 CUTCQ9NTM9 273 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 THAP1Q9NVV9 213 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 PSD3Q9NYI0 1048 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 AHSPQ9NZD4 102 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.8□□□□□ -0.84
SKA1-204ENST00000488454 FIS1Q9Y3D6 152 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 TSC22D4Q9Y3Q8 395 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 TRAF6Q9Y4K3 522 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 TIMM22Q9Y584 194 aa9.8□□□□□ -0.84
SKA1-204ENST00000488454 SPEGQ15772 3267 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 A0A1B0GTL3 188 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 LRIT2A6NDA9 550 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 CDRT15L2A8MXV6 281 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 STMND1H3BQB6 276 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 MANBAO00462 879 aa9.79□□□□□ -0.84
SKA1-204ENST00000488454 P2RX6O15547 441 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms