RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 P2RX6O15547 441 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ZNF749O43361 778 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 SORBS2O94875 1100 aaKnown RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 RECKO95980 971 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 RPS17P08708 135 aaKnown RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 PCNAP12004 261 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CD22P20273 847 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ALDH3A1P30838 453 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 HPDP32754 393 aaPredicted RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 PIK3CGP48736 1102 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CCNG1P51959 295 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 NAGLUP54802 743 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 RPS15AP62244 130 aaKnown RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 HKDC1Q2TB90 917 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 C4orf17Q53FE4 359 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 PRR30Q53SZ7 412 aaPredicted RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 CFAP157Q5JU67 520 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 AGBL2Q5U5Z8 902 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 C1orf189Q5VU69 101 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ATG9BQ674R7 924 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ADNP2Q6IQ32 1131 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 LCN10Q6JVE6 187 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CYB5D1Q6P9G0 228 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ZNF517Q6ZMY9 492 aaPredicted RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 DTWD1Q8N5C7 304 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 METTL27Q8N6F8 245 aaPredicted RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 CSNK1A1LQ8N752 337 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 TEX19Q8NA77 164 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 MFSD9Q8NBP5 474 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 SLC38A9Q8NBW4 561 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 OR4K1Q8NGD4 311 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 OR52B6Q8NGF0 335 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 RDH11Q8TC12 318 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ZNF483Q8TF39 744 aaPredicted RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 CCT6BQ92526 530 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CLIP3Q96DZ5 547 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CCDC126Q96EE4 140 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 PTCD3Q96EY7 689 aaKnown RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 ATP6V1G3Q96LB4 118 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 OR2A5Q96R48 311 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CAPS2Q9BXY5 557 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 SHCBP1LQ9BZQ2 653 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CHRNA10Q9GZZ6 450 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ACTR5Q9H9F9 607 aaPredicted RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 ZBTB26Q9HCK0 441 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 OXSMQ9NWU1 459 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 DHCR7Q9UBM7 475 aaKnown RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 PLEKHB1Q9UF11 243 aaPredicted RBP8.62□□□□□ -1.03
VCP-206ENST00000480327 NDOR1Q9UHB4 597 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 MID2Q9UJV3 735 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 PADI1Q9ULC6 663 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 RNF11Q9Y3C5 154 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 PCDHB3Q9Y5E6 796 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 ACTL7BQ9Y614 415 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 CSMD1Q96PZ7 3565 aa8.62□□□□□ -1.03
VCP-206ENST00000480327 TRBC2A0A5B9 178 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 TMEM120BA0PK00 339 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 HYKKA2RU49 373 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 H3BMH7 237 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 FFAR3O14843 346 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 GPR42O15529 346 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ZSCAN9O15535 394 aaPredicted RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 NDUFS4O43181 175 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 SRPX2O60687 465 aaPredicted RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 SH3BGRLO75368 114 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 OR4F21O95013 312 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 CLDN9O95484 217 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ALAS2P22557 587 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 CXCR2P25025 360 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 HNF4AP41235 474 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 SCTRP47872 440 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 CLCQ05315 142 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 DDX39BQ13838 428 aaKnown RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 SLC9A5Q14940 896 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 CPSF6Q16630 551 aaKnown RBP eCLIP8.61□□□□□ -1.03
VCP-206ENST00000480327 HIST2H2ACQ16777 129 aaPredicted RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 UGT8Q16880 541 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 TCTE1Q5JU00 501 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 FAM69BQ5VUD6 431 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 LIPMQ5VYY2 423 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 HIST2H2AA3Q6FI13 130 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 TMIGD1Q6UXZ0 262 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ZCCHC23Q6ZST2 131 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 TTLL10Q6ZVT0 673 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 VN1R4Q7Z5H5 301 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 MILR1Q7Z6M3 343 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ASPGQ86U10 573 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 BPHLQ86WA6 291 aaPredicted RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.61□□□□□ -1.03
VCP-206ENST00000480327 KRT78Q8N1N4 520 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 RNF175Q8N4F7 328 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 TBC1D19Q8N5T2 526 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ANKRD53Q8N9V6 530 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 TTC29Q8NA56 475 aaPredicted RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 Q8NA96 180 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 OR4F6Q8NGB9 312 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 OR8K5Q8NH50 307 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ZCCHC10Q8TBK6 192 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ADAMTS17Q8TE56 1095 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms