RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 SLC35G6P0C7Q6 338 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 MSL3P1P0C860 447 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 FOLR1P15328 257 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 PDX1P52945 283 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
BEST3-204ENST00000476098 RAE1P78406 368 aaKnown RBP11.09□□□□□ -0.63
BEST3-204ENST00000476098 E2F1Q01094 437 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 RGS1Q08116 209 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 ACSM2AQ08AH3 577 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 PRTGQ2VWP7 1150 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 SPIN4Q56A73 249 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 IL23RQ5VWK5 629 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 ACSM2BQ68CK6 577 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 GALNT18Q6P9A2 607 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 COMMD6Q7Z4G1 85 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 B3GNT8Q7Z7M8 397 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 ARHGEF39Q8N4T4 335 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 CSNK1A1LQ8N752 337 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 DEFB124Q8NES8 71 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 RGMAQ96B86 450 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 SORBS1Q9BX66 1292 aaKnown RBP11.09□□□□□ -0.63
BEST3-204ENST00000476098 STARD5Q9NSY2 213 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 ASIC5Q9NY37 505 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 RUVBL1Q9Y265 456 aaKnown RBP11.09□□□□□ -0.63
BEST3-204ENST00000476098 DLGAP4Q9Y2H0 992 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 PCDHGA1Q9Y5H4 931 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 GPR45Q9Y5Y3 372 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 FAM186AA6NE01 2351 aa11.09□□□□□ -0.63
BEST3-204ENST00000476098 H3BMH7 237 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 RTCAO00442 366 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 TM4SF5O14894 197 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ZSCAN9O15535 394 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 DCTN3O75935 186 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 KLHL18O94889 574 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 SMIM10L1P0DMW3 83 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 G6PDP11413 515 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 BCKDHAP12694 445 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ACPPP15309 386 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 BSGP35613 385 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 PLA2G16P53816 162 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 STXBP1P61764 594 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 MAD2L1Q13257 205 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 TRA2AQ13595 282 aaKnown RBP eCLIP11.08□□□□□ -0.64
BEST3-204ENST00000476098 UBAP2LQ14157 1087 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 CCDC157Q569K6 752 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 TOR1AIP1Q5JTV8 583 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 TMTC4Q5T4D3 741 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 PHF19Q5T6S3 580 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 TMEM214Q6NUQ4 689 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 NOXRED1Q6NXP6 359 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ABHD17CQ6PCB6 329 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 CPSF7Q8N684 471 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 FITM2Q8N6M3 262 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 OR2L5Q8NG80 312 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 UTP15Q8TED0 518 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 SMIM10Q96HG1 83 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 LRRC37BQ96QE4 947 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 CENPKQ9BS16 269 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 SPRTNQ9H040 489 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 PRDM7Q9NQW5 492 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ENAMQ9NRM1 1142 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 AIG1Q9NVV5 245 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 AHSPQ9NZD4 102 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 NOP53Q9NZM5 478 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 ARMCX1Q9P291 453 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 EIF3LQ9Y262 564 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 POLR3HQ9Y535 204 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 COPG1Q9Y678 874 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 TXNDC9O14530 226 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ERI3O43414 337 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 EEDO75530 441 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 KLK1P06870 262 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 IDO1P14902 403 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 TACR1P25103 407 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
BEST3-204ENST00000476098 RAP1GDS1P52306 607 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ARFIP1P53367 373 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 RAB8AP61006 207 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 INSM1Q01101 510 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 GPR19Q15760 415 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 GSTA3Q16772 222 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 OR4C11Q6IEV9 310 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 C6orf89Q6UWU4 347 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 RBM44Q6ZP01 1051 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 SLCO6A1Q86UG4 719 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 LIX1Q8N485 282 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ZNF655Q8N720 491 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 AMER3Q8N944 861 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 SRFBP1Q8NEF9 429 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 GAL3ST3Q96A11 431 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 ZNF501Q96CX3 271 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 KCNC2Q96PR1 638 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 TEFMQ96QE5 360 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 C17orf62Q9BQA9 187 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 EBPLQ9BY08 206 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 BRINP2Q9C0B6 783 aa11.08□□□□□ -0.64
BEST3-204ENST00000476098 DDX31Q9H8H2 851 aaKnown RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 SDR39U1Q9NRG7 319 aaPredicted RBP11.08□□□□□ -0.64
BEST3-204ENST00000476098 BAIAP2L1Q9UHR4 511 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms