RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 HERC3Q15034 1050 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 TBR1Q16650 682 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 UGT8Q16880 541 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 CRTC2Q53ET0 693 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-202ENST00000465601 UNC50Q53HI1 259 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 VWA2Q5GFL6 755 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 BEND6Q5SZJ8 279 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-202ENST00000465601 CEP85LQ5SZL2 805 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 LIPJQ5W064 366 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 GRHL2Q6ISB3 625 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 MED27Q6P2C8 311 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 PDSS2Q86YH6 399 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 SHISA5Q8N114 240 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 AFAP1L2Q8N4X5 818 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 OR52B6Q8NGF0 335 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 OR2Y1Q8NGV0 311 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 STT3BQ8TCJ2 826 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-202ENST00000465601 EXTL1Q92935 676 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 UBE2E3Q969T4 207 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 MIEF2Q96C03 454 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 CDK15Q96Q40 435 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 SLC26A1Q9H2B4 701 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 RHBGQ9H310 441 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 SOX17Q9H6I2 414 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-202ENST00000465601 ZNF282Q9UDV7 671 aaPredicted RBP11.74□□□□□ -0.53
CHPF2-202ENST00000465601 RNF11Q9Y3C5 154 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 NAALAD2Q9Y3Q0 740 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 MAP4K5Q9Y4K4 846 aa11.74□□□□□ -0.53
CHPF2-202ENST00000465601 A0A0G2JN53 185 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 LRIT2A6NDA9 550 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 URADA6NGE7 173 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 COL6A6A6NMZ7 2263 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 C4orf51C9J302 202 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 G3V2L1 256 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 H0YIG0 161 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 PPP6CO00743 305 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 RGS16O15492 202 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 PRPF4O43172 522 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 GALR3O60755 368 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 DNAJB6O75190 326 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SPAG7O75391 227 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 RDH16O75452 317 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SUPT7LO94864 414 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 TBX6O95947 436 aaPredicted RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 UMODP07911 640 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 ZGLP1P0C6A0 271 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SMIM10L1P0DMW3 83 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 MYL2P10916 166 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 CREB1P16220 341 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 IMPDH1P20839 514 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 GSTM2P28161 218 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 HNRNPH1P31943 449 aaKnown RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 STXBP1P61764 594 aaKnown RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 HERVK_113P63132 956 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 RHDQ02161 417 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 DDX39BQ13838 428 aaKnown RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SSPNQ14714 243 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 RBBP7Q16576 425 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 CPSF6Q16630 551 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 CCDC153Q494R4 210 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 DEFB134Q4QY38 66 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 ZNF678Q5SXM1 525 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 ZYG11AQ6WRX3 759 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 ABHD13Q7L211 337 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 MILR1Q7Z6M3 343 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 LAPTM4BQ86VI4 370 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SLC22A9Q8IVM8 553 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 LAS2Q8IYD9 372 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 RNF175Q8N4F7 328 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 BANPQ8N9N5 519 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 L3MBTL4Q8NA19 623 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 CCDC63Q8NA47 563 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 OR7G3Q8NG95 312 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 OR5T3Q8NGG3 340 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 OR51Q1Q8NH59 317 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 ADAMTS17Q8TE56 1095 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 PPP4R1Q8TF05 950 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 ZNF473Q8WTR7 871 aaKnown RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SMIM10Q96HG1 83 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SEC16BQ96JE7 1060 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 CATSPER2Q96P56 530 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 TMEM237Q96Q45 408 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 F2RL3Q96RI0 385 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 SPSB2Q99619 263 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 NTMT1Q9BV86 223 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 C1QTNF3Q9BXJ4 246 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 ERVK-6Q9BXR3 956 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 CENPHQ9H3R5 247 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 WDR54Q9H977 334 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 HCN3Q9P1Z3 774 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 RALYQ9UKM9 306 aaKnown RBP11.73□□□□□ -0.53
CHPF2-202ENST00000465601 POLHQ9Y253 713 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 PLLPQ9Y342 182 aa11.73□□□□□ -0.53
CHPF2-202ENST00000465601 IGLV3-12A0A075B6K2 115 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 A0A1B0GTL3 188 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 ERI3O43414 337 aaKnown RBP11.72□□□□□ -0.53
CHPF2-202ENST00000465601 UGDHO60701 494 aa11.72□□□□□ -0.53
CHPF2-202ENST00000465601 JRKO75564 520 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms