RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 PRSS36Q5K4E3 855 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 CPTPQ5TA50 214 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 GPR153Q6NV75 609 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 LACC1Q8IV20 430 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 P3H2Q8IVL5 708 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 KLHDC8AQ8IYD2 350 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 MCFD2Q8NI22 146 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 ELMO1Q92556 727 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 KCNC2Q96PR1 638 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 SLC46A2Q9BY10 475 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 CEP44Q9C0F1 390 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 ZDHHC6Q9H6R6 413 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 BRF2Q9HAW0 419 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 SCHIP1Q9P0W5 487 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 MAPRE3Q9UPY8 281 aa15.78■□□□□ 0.12
CLCNKA-203ENST00000439316 SZT2Q5T011 3432 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 METTL15A6NJ78 407 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 GABRR3A8MPY1 467 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 MTX2O75431 263 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 SLCO2B1O94956 709 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 ETHE1O95571 254 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 HNF4AP41235 474 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 PCDH1Q08174 1060 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 TEAD4Q15561 434 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 HKDC1Q2TB90 917 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 LRRC73Q5JTD7 316 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 ZNF697Q5TEC3 545 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 ANXA8L1Q5VT79 327 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 Q6ZPB1 254 aaPredicted RBP15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 DNAJC22Q8N4W6 341 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 C11orf65Q8NCR3 313 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 MAL2Q969L2 176 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 COQ8BQ96D53 544 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 TCEAL4Q96EI5 215 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 SAMD11Q96NU1 681 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 MMP27Q9H306 513 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 PNMA8BQ9ULN7 279 aaPredicted RBP15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 SH3BP1Q9Y3L3 701 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 PCDHGA4Q9Y5G9 962 aa15.77■□□□□ 0.12
CLCNKA-203ENST00000439316 ATG2AQ2TAZ0 1938 aa15.77■□□□□ 0.11
CLCNKA-203ENST00000439316 TRAV19A0A0A6YYK7 116 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ADAMDEC1O15204 470 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 AIREO43918 545 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 PSIP1O75475 530 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 AP2A2O94973 939 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 VIPP01282 170 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 PTPN2P17706 415 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 IDSP22304 550 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 SLC19A1P41440 591 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 SLC7A9P82251 487 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 SYT16Q17RD7 645 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ZNF404Q494X3 552 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 DPY19L3Q6ZPD9 716 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 DSG4Q86SJ6 1040 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 SLC22A16Q86VW1 577 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 C1orf52Q8N6N3 182 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 VPS37AQ8NEZ2 397 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ASZ1Q8WWH4 475 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 MYDGFQ969H8 173 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 PBX4Q9BYU1 374 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 SMG9Q9H0W8 520 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 RUBCNLQ9H714 662 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ZBTB20Q9HC78 741 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 NDUFAF4Q9P032 175 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 VPS4AQ9UN37 437 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ZNF451Q9Y4E5 1061 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 HCFC2Q9Y5Z7 792 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 MYOFQ9NZM1 2061 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 TNFRSF11BO00300 401 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 UPK1BO75841 260 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 POP4O95707 220 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 CDK1P06493 297 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ANXA4P09525 319 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 AQP1P29972 269 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 C21orf33P30042 268 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 CTSKP43235 329 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 CLK1P49759 484 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 TEKQ02763 1124 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 CDC20Q12834 499 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 TUBA3EQ6PEY2 450 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 RTL10Q7L3V2 364 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ADGRD2Q7Z7M1 963 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 OR4C15Q8NGM1 316 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 PROX1Q92786 737 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 OR4K3Q96R72 315 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 FEVQ99581 238 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 SGK2Q9HBY8 427 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 TMEM184CQ9NVA4 438 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 STOX2Q9P2F5 926 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ZNF282Q9UDV7 671 aaPredicted RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 TESMINQ9Y4I5 508 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 A3GALT2U3KPV4 340 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 HELZP42694 1942 aaKnown RBP15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 PLXNA2O75051 1894 aa15.76■□□□□ 0.11
CLCNKA-203ENST00000439316 ISPDA4D126 451 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 TAF4O00268 1085 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 KDM1AO60341 852 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 RHOP08100 348 aa15.75■□□□□ 0.11
CLCNKA-203ENST00000439316 GADD45AP24522 165 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms