RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 UBLCP1Q8WVY7 318 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 TMED6Q8WW62 240 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 ATL1Q8WXF7 558 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 FRAT1Q92837 279 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 ST6GALNAC6Q969X2 333 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 NXNL1Q96CM4 212 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 AP2M1Q96CW1 435 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 PABPC5Q96DU9 382 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 C19orf60Q96EN9 201 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 C11orf24Q96F05 449 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 NRBF2Q96F24 287 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 DTD2Q96FN9 168 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 ZNF414Q96IQ9 312 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 PIWIL1Q96J94 861 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 HARBI1Q96MB7 349 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 TTC25Q96NG3 672 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 USP28Q96RU2 1077 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 GPA33Q99795 319 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 GAL3ST1Q99999 423 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 BCL7BQ9BQE9 202 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 SLC39A3Q9BRY0 314 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 ZSCAN5AQ9BUG6 496 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 KATNB1Q9BVA0 655 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 TBC1D10AQ9BXI6 508 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 CADM1Q9BY67 442 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 TMEM117Q9H0C3 514 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 ATG10Q9H0Y0 220 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 S1PR5Q9H228 398 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 KCNK15Q9H427 330 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 FZD8Q9H461 694 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 FN3KQ9H479 309 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 PLEKHA4Q9H4M7 779 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 KLHL31Q9H511 634 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 ACTR5Q9H9F9 607 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 RPF1Q9H9Y2 349 aaKnown RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 KLHL1Q9NR64 748 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 RNF146Q9NTX7 359 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 OCIAD1Q9NX40 245 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 SLCO1C1Q9NYB5 712 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 DBF4Q9UBU7 674 aaPredicted RBP2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 DNAJB4Q9UDY4 337 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 POLLQ9UGP5 575 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 UBQLN2Q9UHD9 624 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 HACL1Q9UJ83 578 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 DNPEPQ9ULA0 475 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 DDX19BQ9UMR2 479 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 CLEC4AQ9UMR7 237 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 KCNK6Q9Y257 313 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 CARD8Q9Y2G2 431 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 MAB21L2Q9Y586 359 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 N6AMT1Q9Y5N5 214 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 RAI2Q9Y5P3 530 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 PAPPAQ13219 1627 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 RNF123Q5XPI4 1314 aa2.38□□□□□ -2.03
R3HDM1-205ENST00000425804 ZNF831Q5JPB2 1677 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 NHSQ6T4R5 1651 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 DISP2A7MBM2 1401 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 BCL9O00512 1426 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 KDM6AO15550 1401 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 CASZ1Q86V15 1759 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 FAM149AA5PLN7 773 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 DDTLA6NHG4 134 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 C17orf100A8MU93 164 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 KBTBD13C9JR72 458 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 NPIPB11E5RHQ5 1161 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 E9PI62 339 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 MS4A18H0YCH9 400 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 H3BQ06 376 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 NDUFS8O00217 210 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 CLDN4O14493 209 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 MAPK13O15264 365 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 SEC14L5O43304 696 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 TBX19O60806 448 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 PRAMEF11O60813 436 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 RAD51DO75771 328 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 RHBDL1O75783 438 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 FLOT1O75955 427 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 RSL1D1O76021 490 aaKnown RBP2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 GLCEO94923 617 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 MFN2O95140 757 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 ZWINTO95229 277 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 CBX6O95503 412 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 YEATS4O95619 227 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 MT-CYBP00156 380 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 GLUD1P00367 558 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 SERPINC1P01008 464 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 NPPAP01160 153 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 CXCL10P02778 98 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 CSF2P04141 144 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 PGK2P07205 417 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 F7P08709 466 aaPredicted RBP2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 CCDC172P0C7W6 258 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 RALAP11233 206 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 PCNAP12004 261 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 KRT3P12035 628 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 ZNF18P17022 549 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 PAX7P23759 505 aa2.37□□□□□ -2.03
R3HDM1-205ENST00000425804 DNASE1P24855 282 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms