RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 EPHA4P54764 986 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 STXBP1P61764 594 aaKnown RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 AP2B1P63010 937 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 RAE1P78406 368 aaKnown RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 HHEXQ03014 270 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 MAP7Q14244 749 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 GPR18Q14330 331 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 KPNB1Q14974 876 aaKnown RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 ADPRMQ3LIE5 342 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 FAM174BQ3ZCQ3 159 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 AASDHQ4L235 1098 aaPredicted RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 TIGD2Q4W5G0 525 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 PAGE3Q5JUK9 113 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 SPANXN4Q5MJ08 99 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 IRAK1BP1Q5VVH5 260 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 FAM219BQ5XKK7 198 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 LAIR1Q6GTX8 287 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 DLEU7Q6UYE1 221 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 RIPOR1Q6ZS17 1223 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 ARMCX6Q7L4S7 300 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 RABEPKQ7Z6M1 372 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 DHDDSQ86SQ9 333 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 PAQR7Q86WK9 346 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 OOSP2Q86WS3 158 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 SLC15A3Q8IY34 581 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 CARFQ8N187 725 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 C2orf73Q8N5S3 287 aaPredicted RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 ANKRD53Q8N9V6 530 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 FAM46DQ8NEK8 389 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 TNIP2Q8NFZ5 429 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 FLVCR1-AS1Q8TAF5 88 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 NT5CQ8TCD5 201 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 SLC37A2Q8TED4 501 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 CREB3L4Q8TEY5 395 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 GAB3Q8WWW8 586 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 GTF2H4Q92759 462 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 VPS33AQ96AX1 596 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 TSSK3Q96PN8 268 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 OR2A14Q96R47 310 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 OR52E6Q96RD3 313 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 CGREF1Q99674 301 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 DPH7Q9BTV6 452 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 TRIM15Q9C019 465 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 BHLHE41Q9C0J9 482 aaPredicted RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 ROGDIQ9GZN7 287 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 MIR1-1HGQ9H1L0 117 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 SPNS1Q9H2V7 528 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 TCEAL2Q9H3H9 227 aaPredicted RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 EPB41L1Q9H4G0 881 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 REEP4Q9H6H4 257 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 DDX31Q9H8H2 851 aaKnown RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 SLC6A20Q9NP91 592 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 PRDM9Q9NQV7 894 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 ACTR10Q9NZ32 417 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 BTNL2Q9UIR0 455 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 DOLKQ9UPQ8 538 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 L3MBTL1Q9Y468 752 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 PCDHGA4Q9Y5G9 962 aa9.37□□□□□ -0.91
POLR1A-202ENST00000409024 DSPP15924 2871 aaKnown RBP9.37□□□□□ -0.91
POLR1A-202ENST00000409024 ASH1LQ9NR48 2969 aaKnown RBP9.36□□□□□ -0.91
POLR1A-202ENST00000409024 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 PRSS51A0A1B0GVH4 220 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 GNG14A0A1W2PPG7 69 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 ARHGAP10A1A4S6 786 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 OR6C74A6NCV1 312 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 LRIT2A6NDA9 550 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 URADA6NGE7 173 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 RNASET2O00584 256 aaKnown RBP9.36□□□□□ -0.91
POLR1A-202ENST00000409024 ACOT8O14734 319 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 SCAMP2O15127 329 aaKnown RBP9.36□□□□□ -0.91
POLR1A-202ENST00000409024 YKT6O15498 198 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 ZW10O43264 779 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 PSMG1O95456 288 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 ANXA6P08133 673 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 ZCCHC18P0CG32 403 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 COX7A2P14406 83 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 UGT2B7P16662 529 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 HOXB6P17509 224 aaKnown RBP9.36□□□□□ -0.91
POLR1A-202ENST00000409024 BCKDHBP21953 392 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 PPIBP23284 216 aaKnown RBP9.36□□□□□ -0.91
POLR1A-202ENST00000409024 TACR1P25103 407 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 HTR1EP28566 365 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 SLC7A2P52569 658 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 MEF2AQ02078 507 aaPredicted RBP9.36□□□□□ -0.91
POLR1A-202ENST00000409024 PDE7AQ13946 482 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 CEACAM7Q14002 265 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 HEPACAMQ14CZ8 416 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 CSRP2Q16527 193 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 FXNQ16595 210 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 DUOXA1Q1HG43 343 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 CPTPQ5TA50 214 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 KIAA1614Q5VZ46 1190 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 LYSMD4Q5XG99 296 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 PMS2CLQ68D20 193 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 FAM71E1Q6IPT2 247 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 NANOGP8Q6NSW7 305 aa9.36□□□□□ -0.91
POLR1A-202ENST00000409024 ARMC6Q6NXE6 501 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms